Job Description P08395 Confidence 79.00% Date Thu Jan 5 11:01:27 GMT 2012 Rank 146 Aligned Residues 133 % Identity 19% Template d2ajta2 SCOP info FucI/AraA N-terminal and middle domains FucI/AraA N-terminal and middle domains AraA N-terminal and middle domain-like Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.									.	160	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.				.
Query SS confidence																																																																						.	.	.	.	.	.	.	.				.
Query Sequence		R	L	Q	E	N	S	L	F	D	I	V	N	T	I	R	Q	A	K	D	D	R	N	I	T	G	I	V	M	D	L	K	N	F	A	G	G	D	Q	P	S	M	Q	Y	I	G	K	A	L	K	E	F	R	D	S	G	K	P	V	Y	A	V	G	E	N	Y	S	Q	G	.	.	.	.	.	.	.	.	Q	Y	Y	.
Query Conservation																																																																						.	.	.	.	.	.	.	.				.
Alig confidence																																						.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.				.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		K	P	L	G	T	T	P	D	E	I	T	A	I	C	R	D	A	N	Y	D	D	P	C	A	G	L	V	V	W	L	H	T	F	S	P	A	.	.	.	.	.	.	.	.	K	M	W	I	N	G	L	T	M	L	N	K	P	L	L	Q	F	H	T	Q	F	N	A	A	L	P	W	D	S	I	D	M	D	F	M	N
Template Known Secondary structure					B		S															T	T										S					.	.	.	.	.	.	.	.												S									S	S	S	S			T	T	T							T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.									.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
				162	.	.	.	.	.	.																.	170	.	.	.	.																								.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query SS confidence		.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query Sequence		.	.	L	A	S	F	A	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	W	L	S	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	V	D	L	H	G	.	.	.	.	.	F	A	T	N	G	L	Y	Y	K	S	L	L	D	K	L
Query Conservation		.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Alig confidence		.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation
Template Sequence		L	N	Q	T	A	H	G	G	R	E	F	G	F	I	G	A	R	M	R	Q	Q	H	A	V	V	T	G	H	W	Q	D	K	Q	A	H	E	R	I	G	S	W	M	R	Q	A	V	S	K	Q	D	T	R	H	L	K	V	C	R	F	G	D	N	M	R	E	V	A	V	T	D	G	D	K	V	A	A	Q	I	K	F
Template Known Secondary structure		S																	T	T								S		T	T																							T							S				T	T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	S	T	H	V	F	R	V	G	T	Y	K	S	A	V	E	P	F	I	R	D	D	M	S	P	A	A	R	E	A	D	S	R	W	I	G	E	L	W	Q	N	Y
Query Conservation
Alig confidence																			.	.	.	.	.							.	.	.
Template Conservation																			.	.	.	.	.							.	.	.
Template Sequence		G	F	S	V	N	T	W	A	V	G	D	L	V	Q	V	V	N	.	.	.	.	.	S	I	S	D	G	D	.	.	.	V	N	A	L	V	D	E	Y	E	S	C	Y
Template Known Secondary structure																			.	.	.	.	.	T						.	.	.												S
Template Predicted Secondary structure																			.	.	.	.	.							.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions