Return to main results Retrieve Phyre Job Id

Job DescriptionP08395
Confidence97.86%DateThu Jan 5 11:01:27 GMT 2012
Rank100Aligned Residues178
% Identity19%Templated1pixa2
SCOP infoClpP/crotonase ClpP/crotonase Biotin dependent carboxylase carboxyltransferase domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   212.......220.........230.........240.........250.........260.........270.........280.........290.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  VEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEI
Query Conservation   


 
  

 
 

  
  

 
   
   

  
 
    
   

     
       
  

  



 
   

 
Alig confidence 



..

















.











.






...........











.



.......
Template Conservation      ..      
      
   
.          
 .       ........... 


 




  .
 
 .......
Template Sequence  GKPL. . KKADAANEEQLKKIEEEI. HQLIKEAQEAGK. ADADVNK. . . . . . . . . . . RGELTALQRIEK. LVEP. . . . . . .
Template Known Secondary structure 



..
S

.
SS.
...........TT


.S
T.......
Template Predicted Secondary structure  ..


.


.
...........




.


.......
Template SS confidence 















































































   16... 20.........30....... ..40......... 50...... ...60........ .70..
 
   292.......300.........310.........320.........330.........340. ........350........
Predicted Secondary structure 


















.............






Query SS confidence 

















































. . . . . . . . . . . . .
















Query Sequence  EKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFANGAIMDGE. . . . . . . . . . . . . ETQGNVGGDTTAAQIRD
Query Conservation     
    
                           



   
 
  
 .............          
   
  
Alig confidence  .................




























.


.............
















Template Conservation  .................


 
              





 
 
. 

 
 
 
 
     

       
  
    
Template Sequence  . . . . . . . . . . . . . . . . . GSWRPLNTLFNPQGNKNGSVAIVKGLGRV. NGKWCVVVASDNKKLAGAWVPGQAECLLRASDT
Template Known Secondary structure  .................T

STT

TT

TTS

S.TT
TTTTTT
TT
Template Predicted Secondary structure  .................

















.









Template SS confidence 















































































   73......80.........90.........100. ........110.........120.........130....
 
   359360.........370.........380.... .....390.........400.........410.........420.......
Predicted Secondary structure 










...........













Query SS confidence 

























. . . . . . . . . . .










































Query Sequence  ARLDPKVKAIVLRVNSPGGSVTASEV. . . . . . . . . . . IRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPST
Query Conservation 
  
  













  

  ...........
   
       



      





 

  

 
 
 
 
Alig confidence 






..
















...........










.






























Template Conservation 
     
.. 
 
 

 



    
                   
  .

 



 
   

 
  
   
 

    
Template Sequence  AKTLHVP. . LVYVLNCSGVKFDEQEKVYPNRRGGGTPFFRNAELNQLG. IPVIVGIYGTNPAGGGYHSISPTVIIAHEKA
Template Known Secondary structure  T

..



GGGSSSTTSTTTT.


STSSSTT
Template Predicted Secondary structure 



..









.











Template SS confidence 















































































   135....140. ........150.........160.........170.........180 .........190.........200.........210.
 
   428.430...
Predicted Secondary structure 
Query SS confidence 





Query Sequence  LTGSIG
Query Conservation   




Alig confidence 





Template Conservation   
 
 
Template Sequence  NMAVGG
Template Known Secondary structure  S

Template Predicted Secondary structure 
Template SS confidence 





   212.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions