Job Description P08395 Confidence 99.93% Date Thu Jan 5 11:01:27 GMT 2012 Rank 9 Aligned Residues 163 % Identity 21% Template c3kthD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form Resolution 3.00 Å

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		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	F	A	N	G	A	I	M	D	G	E	E	T	Q	G	N	V	G	G	D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I	V	L	R	V	N	S	P	G	G	S	V	T	A	S	E	V	I	R	A	E	L	A	A	A	R	A	A	G	K	P	V	V	V	S	M	G	G	M	A	A	S
Query Conservation
Alig confidence														.	.	.	.	.	.	.																																													.	.	.
Template Conservation														.	.	.	.	.	.	.																																													.	.	.
Template Sequence		I	I	M	L	G	S	A	I	D	D	N	V	.	.	.	.	.	.	.	A	N	S	I	V	S	Q	L	L	F	L	A	A	E	D	P	E	K	E	I	S	L	Y	I	N	S	P	G	G	S	I	T	A	G	M	A	I	Y	D	T	M	Q	F	I	.	.	.	K	P	K	V	S	T	I	C	I	G	M	A	A	S
Template Known Secondary structure							S		B					.	.	.	.	.	.	.																S	S	S											B															S	.	.	.	S	S												T
Template Predicted Secondary structure														.	.	.	.	.	.	.																																													.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.			420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		G	G	Y	W	I	S	T	P	A	N	.	.	Y	I	V	A	N	P	S	T	L	T	G	S	I	G	I	F	G	V	I	T	T	V	E	N	S	L	D	S	I	G	V	H	T	D	G	V	S	T	S	P	L	A	D	V	S	I	T	R	A	L	P	P	E	A	Q	L	M	M	Q	L	S	I	E	N	G	Y	K	R
Query Conservation												.	.
Alig confidence												.	.										.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	A	F	L	L	A	A	G	E	K	G	K	R	Y	A	L	P	N	S	E	.	.	.	.	.	.	V	M	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	L	G	G	A	Q	G	Q	A	T	E	I	E	I	A	A	K	R	I	L	L	L	R	D	K
Template Known Secondary structure										S		T	T						T	T			.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S
Template Predicted Secondary structure																							.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.																								.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.		.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		F	I	T	L	V	A	D	A	R	H	S	T	P	E	Q	I	D	K	I	A	Q	G	H	V	W	.	T	G	Q	D	A	K	A	N	G	L	V	D	S	L	G	D	F	D	D
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		L	N	K	V	L	A	E	R	T	G	Q	P	L	E	V	I	E	R	D	T	D	R	D	N	F	K	S	A	E	E	A	L	E	Y	G	L	I	D	K	I	L	T	H	L	E
Template Known Secondary structure																					T	S	S													T	S		S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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