Job Description P08395 Confidence 93.12% Date Thu Jan 5 11:01:27 GMT 2012 Rank 129 Aligned Residues 92 % Identity 22% Template c3k50A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative s41 protease; PDBTitle: crystal structure of putative s41 protease (yp_211611.1) from2 bacteroides fragilis nctc 9343 at 2.00 a resolution Resolution 2.00 Å

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		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																																																			.																									.	.	.	.	.	.
Query SS confidence																																																			.																									.	.	.	.	.	.
Query Sequence		T	G	D	S	I	G	V	V	F	A	N	G	A	I	M	D	G	E	E	T	Q	G	N	V	G	G	D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I	V	L	R	V	.	N	S	P	G	G	S	V	T	A	S	E	V	I	R	A	E	L	A	A	A	R	A	A	G	.	.	.	.	.	.
Query Conservation																																																			.																									.	.	.	.	.	.
Alig confidence														.																								.													.																									.	.	.	.	.	.
Template Conservation														.																								.
Template Sequence		N	G	K	K	V	G	Y	L	X	Y	N	E	.	F	K	A	G	P	T	T	D	S	Q	A	Y	N	D	D	L	R	R	A	F	R	D	F	.	Q	T	G	G	V	N	E	F	V	L	D	L	R	Y	N	T	G	G	S	L	D	C	A	Q	L	L	C	T	X	L	A	P	A	D	K	X	N	Q	L	L	A	L	L
Template Known Secondary structure		T	T											.	B				S	S	T	T																.			T	T									T	T				B													S		G	G	G	T	T	S
Template Predicted Secondary structure														.																								.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
																														397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	V	V	V	S	M	G	G	M	A	A	S	G	G	Y	W	I	S	T	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Y	S	D	K	R	V	E	A	N	Q	D	L	T	F	N	P	E	L	I	Q	S	G	A	N	L	N	L	S	T	V	Y	V	L	T	T	N	A	T	R	G	A	A	E	X	V	I	N	C
Template Known Secondary structure					T	T		G	G	G								G	G	G	T	T	T	S						S								T	T			T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions