Job Description P08395 Confidence 97.89% Date Thu Jan 5 11:01:27 GMT 2012 Rank 99 Aligned Residues 169 % Identity 15% Template c3glmD_ PDB info PDB header:lyase Chain: D: PDB Molecule:glutaconyl-coa decarboxylase subunit a; PDBTitle: glutaconyl-coa decarboxylase a subunit from clostridium2 symbiosum co-crystallized with crotonyl-coa Resolution 2.50 Å

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		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	A	R	E	A	D	S	R	W	I	G	E	L	W	Q	N	Y	L	N	T	V	A	A	N	R	Q	I	P	A	E	Q	V	F	P	G	A	Q	G	L	L	E	G	L	T	K	T	G	G	D	T	A	K	Y	A	L	E	N	K	L	V	D	A	L	A	S	S	A	E	I	E	K	A	L	T	K	E	F	G	W
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.																				.					.									.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.																				.					.									.	.	.	.	.	.	.	.
Template Sequence		P	E	N	E	Q	E	I	K	A	V	E	S	D	I	H	E	S	I	K	K	A	L	D	A	G	I	T	.	.	.	.	.	.	.	.	.	.	.	.	S	E	E	K	L	N	E	R	G	Q	L	S	A	M	Q	R	I	N	A	.	L	I	D	P	.	G	T	W	C	P	L	N	S	.	.	.	.	.	.	.	.
Template Known Secondary structure																										S	S	S	.	.	.	.	.	.	.	.	.	.	.	.								T	T											.		S		T	.	T						S	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.																				.					.									.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.													.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.		.	.	.	.	.	80	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.														.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	T	D	K	N	Y	R	A	I	S	Y	Y	D	Y	A	L	K	T	P	A	D	T	G	D	S	I	G	V	V	F	A	N	G	A	I	M	D	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	Q	G	N	V	G	G	D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.				.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																																							.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	N	P	E	N	N	K	F	G	T	T	N	I	V	N	G	L	G	R	V	.	D	G	K	W	V	Y	I	V	A	S	D	N	K	K	M	A	G	A	W	V	P	G	Q	A	E	N	L	I	R	C	S	D	A	A	K	M	M	H	.	.	L	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			T	T			T	T	S	S		S									.	T	T										T	T	T	G	G	G		B		T	T																T	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.																																							.	.
Template SS confidence
																	83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.											.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	R	V	N	S	P	G	G	S	V	T	A	S	E	.	.	.	.	.	.	.	.	.	.	V	I	R	A	E	L	A	A	A	R	A	A	G	K	P	V	V	V	S	M	G	G	M	A	A	S	G	G	Y	W	I	S	T	P	A	N	Y	I	V	A	N	P	S	T	L	T	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	L	L	N	C	S	G	V	E	F	P	N	Q	D	K	V	Y	P	N	R	R	G	G	G	T	P	F	F	R	N	S	E	L	N	Q	L	G	I	P	V	I	V	G	I	Y	G	T	N	P	A	G	G	G	Y	H	S	I	S	P	T	I	L	I	A	H	Q	D	A	N	M	A
Template Known Secondary structure										B		G	G	G					S	S	S	T	T	S	T	T												T	T									S				T								S	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions