Job Description P08395 Confidence 80.45% Date Thu Jan 5 11:01:27 GMT 2012 Rank 143 Aligned Residues 72 % Identity 21% Template c3f43A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative anti-sigma factor antagonist tm1081; PDBTitle: crystal structure of a putative anti-sigma factor antagonist (tm1081)2 from thermotoga maritima at 1.59 a resolution Resolution 1.59 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	A	L	L	L	D	I	S	G	V	I	V	D	K	P	D	S	S	Q	R	F	S	K	L	S	R	Q	L	L	G	A	S	S	D	R	L	Q	E	N	S	L	F	D	I	V	N	T	I	R	Q	A	K	D	D	R	N	I	T	G	I	V	M	D	L	K	N	F	A	G	G	D	Q	P	S	M	Q	Y	I	G
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	V	V	I	L	X	P	N	K	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	E	N	A	H	L	F	K	K	W	V	F	D	E	F	L	N	K	G	Y	N	K	I	F	L	V	L	S	D	V	E	S	I	D	S	F	S	L	G	V	I	V
Template Known Secondary structure		T	T								S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	T												T	G	G	G	T									T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.																										20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	K	E	F	R	D	S	G	K	P	V	Y	A	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	L	K	S	I	S	S	S	G	G	F	F	A	L	V	S
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions