Job Description P08395 Confidence 55.72% Date Thu Jan 5 11:01:27 GMT 2012 Rank 173 Aligned Residues 88 % Identity 35% Template c3djaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein ct_858; PDBTitle: crystal structure of cpaf solved with mad Resolution 2.90 Å

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		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I	V	L	R	V	.	N	S	P	G	G	S	V	T	A	S	E	V	I	R	A	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.									.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.
Template Sequence		E	E	F	A	K	I	I	Q	V	F	S	S	N	.	.	T	E	A	L	I	I	D	Q	T	N	N	P	G	G	S	V	L	Y	L	Y	A	L	L	S	X	L	T	D	R	P	L	E	L	P	K	H	R	X	I	L	T	Q	D	E	V	V	D	A	L	D	W	L	T	L	L	E	N	V	D	T	N	V	E	S	R
Template Known Secondary structure															.	.		S								S	B			B											T	S		S	S																										S	T	T			S
Template Predicted Secondary structure															.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
																																																							390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	A	R	A	A	G	K	P	V	V	V	S	M	G	G	M	A	A	S	G	G	Y	W	I	S	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																																													.
Template Sequence		L	A	L	G	D	N	X	E	G	Y	T	V	D	L	Q	V	A	E	Y	L	K	S	F	G	R	Q	V	L	N	C	W	S	K	G	D	I	E	L	S	T	P	I	P	L	F	G	F	E	K	I	H	P	H	P	R	V	Q	Y	S	.	K	P	I	C	V	L	I	N	E	Q	D	F	S	C	A	D	F	F	P	V
Template Known Secondary structure						S			T	T														T	T									T	T			S	S		S		B		G	G	G		S						S	S					.	S								T	T	B		T
Template Predicted Secondary structure																																																													.
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.		.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
		417	.						.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		P	A	.	.	.	.	.	N	Y	I	V	A	N	P	S	T	L	T	G	S	I	G	I	F	G	V	I	T	T
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.
Template Conservation
Template Sequence		V	L	K	D	N	D	R	A	L	I	V	G	T	R	T	A	G	A	G	G	F	V	F	N	V	Q	F	P	N
Template Known Secondary structure						T	T														S
Template Predicted Secondary structure
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions