Job Description P08395 Confidence 98.59% Date Thu Jan 5 11:01:27 GMT 2012 Rank 83 Aligned Residues 144 % Identity 23% Template c2pg8C_ PDB info PDB header:ligand binding protein Chain: C: PDB Molecule:dpgc; PDBTitle: crystal structure of r254k mutanat of dpgc with bound substrate analog Resolution 3.00 Å

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		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370														.	.	.	.	.	.	.	.	.	380	.																													.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	N	S	P	G	G	S	V	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	V	I	R	A	E
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	M	E	T	A	V	D	L	A	L	L	D	P	G	V	R	V	G	L	L	R	G	G	V	M	S	H	P	R	Y	R	G	K	R	V	F	S	A	G	I	N	L	K	Y	L	S	Q	G	G	I	S	L	V	D	F	L	M	R	K	E	L	G	Y	I	H	K	L	V	R	G	V	L	T	N	D	D	R	P	G
Template Known Secondary structure															T	T										B			S	G	G	G	T	T		B						B								T				T	T	T	T							T													T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	A	R	A	A	G	K	P	V	V	V	S	M	G	G	M	A	A	S	G	G	Y	W	I	S	T	P	A	N	Y	I	V	A	N	P	S	T	L	T	G	S	I	G	I	F	G	V	I	T	T	V	E	N	S	L	D	S	I	G	V	H	T	D	G	V	S	T	S	P	L	A	D	V	S	I	T	R	A
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	W	H	S	P	R	I	E	K	P	W	V	A	A	V	D	G	F	A	I	G	G	G	A	Q	L	L	L	V	F	D	R	V	L	A	S	S	D	A	Y	F	S	L	P	A	A	K	E	G	I	I	P	G	A	A	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T		S											S	S				T						T	T	S		S						T	T									S	S	S				T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.				.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		L	P	P	E	A	Q	L	M	M	Q	L	S	I	E	N	G	Y	K	R	F	I	T	L	V	A	D	A	R	H	S	T	P	E	Q	I	D	K	I	A	Q	G	H	V	W	T	G	Q	D	A	K	A	N	G	L	V	D	S	L	.	.	.	G	D	F	D	D	A	V	A	K	A	A	E	L
Query Conservation																																																												.	.	.
Alig confidence		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	L	G	R	F	A	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	S	R	Q	V	I	L	E	G	R	R	I	W	A	K	E	P	E	A	R	L	L	V	D	E	V	V	E	P	D	E	L	D	A	A	I	E	R	S	L	T	R
Template Known Secondary structure		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	S						T	T	S	G	G	G	G	G	T		S					T	T	T										G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
									332	.	.	.	.	.	.	.																	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions