Job Description P08395 Confidence 99.94% Date Thu Jan 5 11:01:27 GMT 2012 Rank 4 Aligned Residues 187 % Identity 20% Template c2deoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:441aa long hypothetical nfed protein; PDBTitle: 1510-n membrane protease specific for a stomatin homolog from2 pyrococcus horikoshii Resolution 3.00 Å

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		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	D	S	I	G	V	V	F	A	N	G	A	I	M	D	G	E	E	T	Q	G	N	V	G	G	D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I	V	L	R	V	N	S	P	G	G	S	V	T	A	S	E	V	I	R	A	E	L	A	A	A	R	A	A	G	K	P	V	V	V	S	M
Query Conservation
Alig confidence																				.	.	.	.	.	.	.												.
Template Conservation																				.	.	.	.	.	.	.												.
Template Sequence		A	K	N	I	V	Y	V	A	Q	I	K	G	Q	I	T	S	Y	T	.	.	.	.	.	.	.	Y	D	Q	F	D	R	Y	I	T	I	A	.	E	Q	D	N	A	E	A	I	I	I	E	L	D	T	P	G	G	R	A	D	A	X	X	N	I	V	Q	R	I	Q	Q	S	K	I	P	V	I	I	Y	V	Y	P	P
Template Known Secondary structure													S							.	.	.	.	.	.	.												.			T	T		S								B			S	S			S										T		S	S								S	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.												.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	M	A	A	S	G	G	Y	W	I	S	T	P	A	N	Y	I	V	A	N	P	S	T	L	T	G	S	I	G	I	F	G	V	I	T	T	V	E	N	S	L	D	S	I	G	V	H	T	D	G	V	S	T	S	P	L	A	D	V	S	I	T	R	A	L	P	P	E	A	Q	L	M	M	Q	L	S	I	E	N
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	S	A	A	S	A	G	T	Y	I	A	L	G	S	H	L	I	A	X	A	P	G	T	S	I	G	A	C	R	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T					T								T	S	S						T	T					S				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.		.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.												.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure																															.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	K	R	F	I	T	L	V	A	D	A	R	H	S	T	P	E	Q	I	D	K	I	A	Q	G	H	V	W	.	T	G	Q	D	A	K	A	N	G	L	V	D	S	L	G	D	F	D	D	A	V	A	K	A	A	E	.	.	.	.	.	.	.	.	.	.	.	L	A	K	V	K	Q	W	H	L	E	Y	Y	V
Query Conservation																															.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	F	I	A	Y	I	K	S	L	A	Q	E	S	G	R	N	A	T	I	A	E	E	F	I	T	K	D	L	S	L	T	P	E	E	A	L	K	Y	G	V	I	E	V	V	A	R	D	I	N	E	L	L	K	K	S	N	G	X	K	T	K	I	P	V	N	G	R	Y	V	T	L	N	F	T	N	V	E	V	R	Y
Template Known Secondary structure		T											T	T	T	S											T	T											T	T	S		S				S	S									T	T		B		S	S		B	T	T	B			B				S	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	T	F	F	D	K	V	M	D	N	M	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	P	S	F	K	D	K	L	I	S	Y	I	T	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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