Job Description P08395 Confidence 98.09% Date Thu Jan 5 11:01:27 GMT 2012 Rank 97 Aligned Residues 273 % Identity 19% Template c2a7sD_ PDB info PDB header:ligase Chain: D: PDB Molecule:probable propionyl-coa carboxylase beta chain 5; PDBTitle: crystal structure of the acyl-coa carboxylase, accd5, from2 mycobacterium tuberculosis Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.								.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.																													.
Query SS confidence																																												.	.	.	.	.	.	.																													.
Query Sequence		L	G	A	S	S	D	R	L	Q	E	N	S	L	F	D	I	V	N	T	I	R	Q	A	K	D	D	R	N	I	T	G	I	V	M	D	L	K	N	F	A	G	G	.	.	.	.	.	.	.	D	Q	P	S	M	Q	Y	I	G	K	A	L	K	E	F	R	D	S	G	K	P	V	Y	A	V	G	E	N	.	Y	S
Query Conservation																																												.	.	.	.	.	.	.																													.
Alig confidence																														.	.									.				.	.	.	.	.	.	.																	.												.
Template Conservation																														.	.									.																											.
Template Sequence		A	T	V	F	G	G	S	L	G	E	V	Y	G	E	K	I	V	K	V	Q	E	L	A	I	K	T	G	R	.	.	P	L	I	G	I	N	D	G	.	A	G	A	R	I	Q	E	G	V	V	S	L	G	L	Y	S	R	I	F	R	N	N	I	L	A	S	.	G	V	I	P	Q	I	S	L	I	M	G	A	A	A
Template Known Secondary structure		T	T	S	G	G	G		B																			T		.	.									.		S	B		G	G	G	T	T																S	T	.	T	T	S
Template Predicted Secondary structure																														.	.									.																											.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		Q	G	Q	Y	Y	L	A	S	F	A	N	K	I	W	L	.	S	P	Q	G	V	V	D	L	H	G	F	A	T	N	G	L	Y	Y	K	S	L	L	D	K	L	K	V	S	T	H	V	F	R	V	G	T	Y	K	S	A	V	E	P	F	I	R	D	D	M	S	P	A	A	R	E	A	D	S	R	W	I	G	E	L
Query Conservation																	.
Alig confidence																	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	H	V	Y	S	P	A	L	T	D	F	V	I	M	V	D	Q	T	S	Q	M	F	I	T	G	P	D	V	I	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	G						S	S						T	T	T					S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																					.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	N	Y	L	N	T	V	A	A	N	R	Q	I	P	A	E	Q	V	F	P	G	A	Q	G	L	L	E	G	L	T	K	T	G	G	D	T	A	K	Y	A	L	E	N	K	L	V	D	A	L	A	.	S	S	A	E	I	E	K	A	L	T	K	E	F	G	W	S	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	T	G	E	E	V	T	M	E	E	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	T	H	M	A	K	S	G	T	A	H	Y	A	A	S	G	E	Q	D	A	F	D	Y	V	R	E	L	L	S	Y	L	P	P	N	N	S	T	D	A	P	R	Y	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	S				S				S	S															S		S	S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										225	.	.	.	.	230	.	.	.	.	.	.	.																.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
																								303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.							.	330	.	.	.	.	.	.	.										.	.	340	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	D	K	N	Y	R	A	I	S	Y	Y	D	Y	A	L	K	T	P	A	D	T	G	D	S	I	.	.	.	.	.	.	G	V	V	F	A	N	G	A	I	.	.	.	.	.	.	.	.	.	M	D	G	E	E	T	Q	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	P	T	G	P	I	E	E	N	L	T	D	E	D	L	E	L	D	T	L	I	P	D	S	P	N	Q	P	Y	D	M	H	E	V	I	T	R	L	L	D	D	E	F	L	E	I	Q	A	G	Y	A	Q	N	I	V	V	G	F	G	R	I	D	G	R	P	V	G	I	V	A	N	Q	P	T	H	F	A	G
Template Known Secondary structure							S		G	G	G	S								G	G	G	T	S		S	S	T	T					T								S	S	S						S	T	T	S		T	T									T	T										T	T	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.							.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																	.	.																				.						.	.	.	.	.	.
Query SS confidence																	.	.																				.						.	.	.	.	.	.
Query Sequence		N	V	G	G	D	T	T	A	A	Q	I	R	D	A	R	.	.	L	D	P	K	V	K	A	I	V	L	R	V	N	S	P	G	G	S	V	.	T	A	S	E	V	.	.	.	.	.	.	I	R	A	E	L	A	A	A	R	A	A	G	K	P	V	V	V	S	M	G	G	M	A	A	S	G	G	Y	W	I	S	T
Query Conservation																	.	.																				.						.	.	.	.	.	.
Alig confidence																	.	.						.														.						.	.	.	.	.	.
Template Conservation																								.
Template Sequence		C	L	D	I	N	A	S	E	K	A	A	R	F	V	R	T	C	D	C	F	N	I	.	P	I	V	M	L	V	D	V	P	G	F	L	P	G	T	D	Q	E	Y	N	G	I	I	R	R	G	A	K	L	L	Y	A	Y	G	E	A	T	V	P	K	I	T	V	I	T	R	K	A	Y	G	G	A	Y	C	V	M	G
Template Known Secondary structure			B																		T	T		.											B									T	T																	S																		T	T
Template Predicted Secondary structure																								.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
						417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	P	A	N	Y	I	V	A	N	P	S	T	L	T	G	S	I	G
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		S	K	D	M	G	C	D	V	N	L	A	W	P	T	A	Q	I	A	V	M	G
Template Known Secondary structure			G	G	G	T		S						T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions