Return to main results Retrieve Phyre Job Id

Job DescriptionP08395
Confidence99.90%DateThu Jan 5 11:01:27 GMT 2012
Rank14Aligned Residues148
% Identity24%Templatec1y7oE_
PDB info PDB header:hydrolaseChain: E: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: the structure of streptococcus pneumoniae a153p clpp
Resolution2.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   330.........340.........350.........360.........370.........380.........390.........400.........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  VVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAARAAGKPVVVSMGGMAAS
Query Conservation 

   
 
  
           
   
  
  
  













  

  
   
       



      


Alig confidence 











.......











































...













Template Conservation 

 
 
 
    .......
  

  
  
        
 
 





 
 
   


 
   ...   
 
   
 


Template Sequence  IIXLTGPVEDNX. . . . . . . ANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTXNFI. . . KADVQTIVXGXAAS
Template Known Secondary structure  S
B
.......
SSS


B
S...SS
T
Template Predicted Secondary structure 


.......











...






Template SS confidence 















































































   27..30........ .40.........50.........60.........70.........80.. .......90......
 
   410.........420 .........430.........440.........450.........460.........470.........480.......
Predicted Secondary structure 


..























Query SS confidence 










. .


































































Query Sequence  GGYWISTPANY. . IVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGYKR
Query Conservation 


 

  

 ..
 
 
 
 





            
 

    
  
           
              
  
Alig confidence 










..







......




............................

















..
Template Conservation   
  
  

 
  
     
 ......  

 ............................
    

      
    ..
Template Sequence  XGTVIASSGAKGKRFXLPNAE. . . . . . YXIHQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . PXAPEHLLKTRNTLEKIL. .
Template Known Secondary structure  TS
TT

TT
......


............................


..
Template Predicted Secondary structure 







......
............................


..
Template SS confidence 















































































   97..100.........110....... ..120.. .......130.........140
 
   488.490.........500.........510.. .......520........
Predicted Secondary structure 






.








Query SS confidence 
























.















Query Sequence  FITLVADARHSTPEQIDKIAQGHVW. TGQDAKANGLVDSLGD
Query Conservation 
   

  
      
   
 


 .

  
   



 

 
Alig confidence  .....



















.















Template Conservation  .....
  
      
          

 

   



 
  
Template Sequence  . . . . . AENSGQSXEKVHADAERDNWXSAQETLEYGFIDEIXA
Template Known Secondary structure  .....T

TS


B
TS
S

Template Predicted Secondary structure  .....

















Template SS confidence 









































   155....160.........170.........180.........190.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions