Job Description P08395 Confidence 98.14% Date Thu Jan 5 11:01:27 GMT 2012 Rank 96 Aligned Residues 265 % Identity 17% Template c1xnwD_ PDB info PDB header:ligase Chain: D: PDB Molecule:propionyl-coa carboxylase complex b subunit; PDBTitle: acyl-coa carboxylase beta subunit from s. coelicolor (pccb),2 apo form #2, mutant d422i Resolution 2.60 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.								.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.																													.
Query SS confidence																																												.	.	.	.	.	.	.																													.
Query Sequence		L	G	A	S	S	D	R	L	Q	E	N	S	L	F	D	I	V	N	T	I	R	Q	A	K	D	D	R	N	I	T	G	I	V	M	D	L	K	N	F	A	G	G	.	.	.	.	.	.	.	D	Q	P	S	M	Q	Y	I	G	K	A	L	K	E	F	R	D	S	G	K	P	V	Y	A	V	G	E	N	.	Y	S
Query Conservation																																												.	.	.	.	.	.	.																													.
Alig confidence																														.	.									.				.	.	.	.	.	.	.																	.												.
Template Conservation																														.	.									.																											.
Template Sequence		F	T	V	F	G	G	A	L	G	E	V	Y	G	Q	K	I	V	K	V	M	D	F	A	L	K	T	G	C	.	.	P	V	V	G	I	N	D	S	.	G	G	A	R	I	Q	E	G	V	A	S	L	G	A	Y	G	E	I	F	R	R	N	T	H	A	S	.	G	V	I	P	Q	I	S	L	V	V	G	P	C	A
Template Known Secondary structure		T	T	T	G	G	G		B																		T	T		.	.									.		S	B		G	G	G	T	T																T	T	.	T	T	S								S			B
Template Predicted Secondary structure																														.	.									.																											.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		Q	G	Q	Y	Y	L	A	S	F	A	N	K	I	W	L	.	S	P	Q	G	V	V	D	L	H	G	F	A	T	N	G	L	Y	Y	K	S	L	L	D	K	L	K	V	S	T	H	V	F	R	V	G	T	Y	K	S	A	V	E	P	F	I	R	D	D	M	S	P	A	A	R	E	A	D	S	R	W	I	G	E	L
Query Conservation																	.
Alig confidence																	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	A	V	Y	S	P	A	I	T	D	F	T	V	M	V	D	Q	T	S	H	M	F	I	T	G	P	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	G						S	S						S	S	S				B	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	N	Y	L	N	T	V	A	A	N	R	Q	I	P	A	E	Q	V	F	P	G	A	Q	G	L	L	E	G	L	T	K	T	G	G	D	T	A	K	Y	A	L	E	N	K	L	V	D	A	L	.	A	S	S	A	E	I	E	K	A	L	T	K	E	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	I	K	T	V	T	G	E	D	V	G	F	E	E	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	T	H	N	S	T	S	G	V	A	H	H	M	A	G	D	E	K	D	A	V	E	Y	V	K	Q	L	L	S	Y	L	P	S	N	N	L	S	E	P	P	A	F	P
Template Known Secondary structure		.	.	.	.	.																S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	S								S	S													T	T	S		S	S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.																.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
			301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																																				.	.	330	.	.	.	.						.	.	.	.	.
Predicted Secondary structure		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query SS confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query Sequence		.	W	S	K	T	D	K	N	Y	R	A	I	S	Y	Y	D	Y	A	L	K	T	P	A	D	T	G	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	V	V	F	A	N	.	.	.	.	.	G	A	I	M	D
Query Conservation		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.				.	.
Template Conservation																																																																																.	.
Template Sequence		E	E	A	D	L	A	V	T	D	E	D	A	E	L	D	T	I	V	P	D	S	A	N	Q	P	Y	D	M	H	S	V	I	E	H	V	L	D	D	A	E	F	F	E	T	Q	P	L	F	A	P	N	I	L	T	G	F	G	R	V	E	G	R	P	V	G	I	V	A	N	Q	P	M	Q	F	A	G	C	L	.	.
Template Known Secondary structure							S										T	T	S		S	S	T	T										T	T	T	S	G	G	G					S	S	S	S	S	S	T	T									T	T										T	T	T	G	G	G		B	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.								380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.
Query Sequence		G	E	E	T	Q	G	N	V	G	G	D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I	V	L	R	V	N	S	P	G	G	S	V	.	.	.	.	.	.	.	T	A	S	E	V	I	R	A	E	L	A	A	A	R	A	A	G	K	P	V	V	V	S	M	G	G	M	A	A	S	G	G	Y
Query Conservation																																										.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																						.	.													.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																						.	.
Template Sequence		.	.	.	.	.	D	I	T	A	S	E	K	A	A	R	F	V	R	T	C	D	A	F	N	V	P	.	.	V	L	T	F	V	D	V	P	G	F	L	P	G	V	D	Q	E	H	D	G	I	I	R	R	G	A	K	L	I	F	A	Y	A	E	A	T	V	P	L	I	T	V	I	T	R	K	A	F	G	G	A	Y
Template Known Secondary structure		.	.	.	.	.																		T	T			.	.										B			S					T	T	T																	S
Template Predicted Secondary structure		.	.	.	.	.																						.	.
Template SS confidence
							349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		413	.					.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		W	I	.	.	.	.	S	T	P	A	N	Y	I	V	A	N	P	S	T	L	T	G	S	I	G
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		I	V	M	G	S	K	H	L	G	A	D	L	N	L	A	W	P	T	A	Q	I	A	V	M	G
Template Known Secondary structure				T	T		G	G	G	T		S						T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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