Job Description P08395 Confidence 98.32% Date Thu Jan 5 11:01:27 GMT 2012 Rank 93 Aligned Residues 265 % Identity 19% Template c1x0uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:hypothetical methylmalonyl-coa decarboxylase alpha subunit; PDBTitle: crystal structure of the carboxyl transferase subunit of putative pcc2 of sulfolobus tokodaii Resolution 2.20 Å

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.								.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.																													.
Query SS confidence																																												.	.	.	.	.	.	.																													.
Query Sequence		L	G	A	S	S	D	R	L	Q	E	N	S	L	F	D	I	V	N	T	I	R	Q	A	K	D	D	R	N	I	T	G	I	V	M	D	L	K	N	F	A	G	G	.	.	.	.	.	.	.	D	Q	P	S	M	Q	Y	I	G	K	A	L	K	E	F	R	D	S	G	K	P	V	Y	A	V	G	E	N	.	Y	S
Query Conservation																																												.	.	.	.	.	.	.																													.
Alig confidence																														.	.									.				.	.	.	.	.	.	.																		.											.
Template Conservation																														.	.									.																												.
Template Sequence		F	T	V	L	G	G	S	L	G	E	T	H	A	N	K	I	V	R	A	Y	E	L	A	L	K	V	G	A	.	.	P	V	V	G	I	N	D	S	.	G	G	A	R	I	Q	E	G	A	L	S	L	E	G	Y	G	A	V	F	K	M	N	V	M	A	S	G	.	V	I	P	Q	I	T	I	M	A	G	P	A	A
Template Known Secondary structure		T	T	T	G	G	G		B																			T		.	.									.		S	B		G	G	G																			T	T	.	T	S								S
Template Predicted Secondary structure																														.	.									.																												.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		Q	G	Q	Y	Y	L	A	S	F	A	N	K	I	W	L	S	P	Q	.	.	G	V	V	D	L	H	G	F	A	T	N	G	L	Y	Y	K	S	L	L	D	K	L	K	V	S	T	H	V	F	R	V	G	T	Y	K	S	A	V	E	P	F	I	R	D	D	M	S	P	A	A	R	E	A	D	S	R	W	I	G	E
Query Conservation																				.	.
Alig confidence																				.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	A	V	Y	S	P	A	L	T	D	F	I	I	M	I	K	G	D	A	Y	Y	M	F	V	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	G						S	S							S	T	T					S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																						.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	W	Q	N	Y	L	N	T	V	A	A	N	R	Q	I	P	A	E	Q	V	F	P	G	A	Q	G	L	L	E	G	L	T	K	T	G	G	D	T	A	K	Y	A	L	E	N	K	L	V	D	A	L	A	.	S	S	A	E	I	E	K	A	L	T	K	E	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	P	E	I	T	K	V	V	L	G	E	E	V	S	F	Q	D	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	V	H	A	T	K	S	G	V	V	H	F	M	V	D	S	E	Q	E	A	I	N	L	T	K	R	L	L	S	Y	L	P	S	N	N	M	E	E	P	P	Y	I
Template Known Secondary structure		.	.	.	S							S	S										B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T				S				S	S															S		S	S	T	T	S
Template Predicted Secondary structure		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.																.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																																				.	.	330	.	.	.	.						.	.	.	.	.	340
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Query Sequence		W	S	K	T	D	K	N	Y	R	A	I	S	Y	Y	D	Y	A	L	K	T	P	A	D	T	G	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	V	V	F	A	N	.	.	.	.	.	G	A	I	M	D	G
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.				.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		D	T	G	D	P	A	D	R	D	A	T	G	V	E	Q	I	V	P	N	D	A	A	K	P	Y	N	M	R	E	I	I	Y	K	I	V	D	N	G	E	F	L	E	V	H	K	H	W	A	Q	N	I	I	V	G	F	A	R	I	A	G	N	V	V	G	I	V	A	N	N	P	E	E	F	G	G	S	I	.	.	.
Template Known Secondary structure		S									S	S		G	G	G	S	S		S	S	T	T													S	G	G	G						S	T	T	S	S	T	T									T	T										T	T	S	G	G	G		B	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.								380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.
Query Sequence		E	E	T	Q	G	N	V	G	G	D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I	V	L	R	V	N	S	P	G	G	S	V	.	.	.	.	.	.	.	T	A	S	E	V	I	R	A	E	L	A	A	A	R	A	A	G	K	P	V	V	V	S	M	G	G	M	A	A	S	G	G	Y	W
Query Conservation																																									.	.	.	.	.	.	.
Alig confidence		.	.	.	.																					.	.														.	.	.	.	.	.	.
Template Conservation		.	.	.	.																					.	.
Template Sequence		.	.	.	.	D	I	D	A	A	D	K	A	A	R	F	I	R	F	C	D	A	F	N	I	.	.	P	L	I	S	L	V	D	T	P	G	Y	V	P	G	T	D	Q	E	Y	K	G	I	I	R	H	G	A	K	M	L	Y	A	F	A	E	A	T	V	P	K	I	T	V	I	V	R	K	S	Y	G	G	A	H	I
Template Known Secondary structure		.	.	.	.																		T	T		.	.											B			S						T	T																	S
Template Predicted Secondary structure		.	.	.	.																					.	.
Template SS confidence
						343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		414	.	.	.					.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		I	S	T	P	.	.	.	.	A	N	Y	I	V	A	N	P	S	T	L	T	G	S	I	G
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		A	M	S	I	K	S	L	G	A	D	L	V	Y	A	W	P	T	A	E	I	A	V	T	G
Template Known Secondary structure			T			G	G	G	T		S						T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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