Job Description P08395 Confidence 75.57% Date Thu Jan 5 11:01:27 GMT 2012 Rank 149 Aligned Residues 108 % Identity 19% Template c1fc9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:photosystem ii d1 protease; PDBTitle: photosystem ii d1 c-terminal processing protease Resolution 1.90 Å

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		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	D	S	I	G	V	V	F	A	N	G	A	I	M	D	G	E	E	T	Q	G	N	V	G	G	D	T	T	A	A	Q	I	R	D	A	R	L	D	P	K	V	K	A	I	V	L	R	V	N	S	.	P	G	G	S	V	T	A	S	E	V	I	R	A	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																			.													.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																			.
Template Sequence		A	K	Q	Q	L	G	Y	V	R	L	A	T	.	.	.	.	.	.	.	.	F	N	S	N	T	T	A	A	A	Q	Q	A	F	T	E	L	S	K	.	Q	G	V	A	G	L	V	L	D	I	R	N	N	G	G	G	L	F	P	A	G	V	N	V	A	R	M	L	V	D	R	G	D	L	V	L	I	A	D	S	Q
Template Known Secondary structure		S	S	S										.	.	.	.	.	.	.	.		S	T	T															.	T	T		S							T	T																			S	S								S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																			.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.									.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
											390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.						.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	A	A	R	A	A	G	K	P	V	V	V	S	M	G	G	M	A	A	S	G	G	Y	W	I	S	T	P	A	.	.	.	.	.	N	Y	I	V	A	N	P	S	T	L	T	G	S	I	G	I	F	G	V	I	T	T
Query Conservation		.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation
Template Sequence		G	I	R	D	I	Y	S	A	D	G	N	S	I	D	S	A	T	P	L	V	V	L	V	N	R	G	T	A	S	A	S	E	V	L	A	G	A	L	K	D	S	K	R	G	L	I	A	G	E	R	T	F	G	K	G	L	I	Q	T	V	V	D	L	S	D
Template Known Secondary structure		S									S			S		S	S	S								T	T			T												T	T	S						S															T	T
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions