Return to main results Retrieve Phyre Job Id

Job DescriptionP69423
Confidence2.35%DateThu Jan 5 12:11:32 GMT 2012
Rank52Aligned Residues15
% Identity20%Templatec3ofz2_
PDB info PDB header:ribosomeChain: 2: PDB Molecule:50s ribosomal protein l34; PDBTitle: crystal structure of the e. coli ribosome bound to clindamycin. this2 file contains the 50s subunit of the first 70s ribosome bound to3 clindamycin.
Resolution3.29 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   185....190.........
Predicted Secondary structure 
Query SS confidence 














Query Sequence  SPEDLRKKRPYVLVG
Query Conservation      
   

   
 
Alig confidence 














Template Conservation 


  



 




Template Sequence  QPSVLKRNRSHGFRA
Template Known Secondary structure 


S
Template Predicted Secondary structure 


Template SS confidence 














   6...10.........20
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions