Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8A4
Confidence96.33%DateThu Jan 5 11:07:19 GMT 2012
Rank31Aligned Residues116
% Identity25%Templated1rkba_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170.........180 .........190....
Predicted Secondary structure 










......................................












Query SS confidence 



























. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .













Query Sequence  VILLGVSRCGKTPTSLYLAMQFGIRAAN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YPFIADDMDNLVLP
Query Conservation 














 


 
 
 



...................................... 





     

Alig confidence 



























......................................





...




Template Conservation 
 
 
  






   

  

   
                                          


...     
Template Sequence  ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDELDNQMREGGVIVD. . . YHGCD
Template Known Secondary structure 
STTSS

TT
B



SSSS


B


...
S

T
Template Predicted Secondary structure 


















...


Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70....... ..80..
 
   195....200.........210.........220...... ...230.........240.........250........ .260.........
Predicted Secondary structure 










....











.
Query SS confidence 































. . . .































.










Query Sequence  ASLKPLQHKLFGLTIDPERLAAIREERRENSR. . . . YASLRQCRMEVAEVEALYRKNQIPWINSTNYS. VEEIATKILDI
Query Conservation   

     








  
  

  

  
 ....

    
  

  
  
  
   





 

.




  

  
Alig confidence 































....































.










Template Conservation            
 
    
    
   
                                  
       
   
  
   
Template Sequence  FFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKW
Template Known Secondary structure  TS
GGG
S

TT

TTS
GGG
SS
Template Predicted Secondary structure 


























Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   270.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  MG
Query Conservation 
 
Alig confidence 

Template Conservation 
 
Template Sequence  IE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   163.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions