Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8A4
Confidence97.12%DateThu Jan 5 11:07:19 GMT 2012
Rank14Aligned Residues125
% Identity18%Templated1ak2a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution1.92

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160.........170.........180.........190....
Predicted Secondary structure 































..............................
Query SS confidence 

















































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  LRNLDQAQVILLGVSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation     
  
















 


 
 
 



 





     

..............................
Alig confidence 




...









































..............................
Template Conservation 



 ...
 
 
  







  

  
    
                                             
Template Sequence  PKGVR. . . AVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVLELIEKNLET
Template Known Secondary structure 



...

TTSST
T
TT



TS
Template Predicted Secondary structure 


...














Template SS confidence 















































































   14.... .20.........30.........40.........50.........60.........70.........80.........90
 
   195....200.........210.........220......... 230.........240..
Predicted Secondary structure  ..........................













......
Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . .


































. . . . . .












Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . ASLKPLQHKLFGLTIDPERLAAIREERRENSRYAS. . . . . . LRQCRMEVAEVEA
Query Conservation  .......................... 

     








  
  

  

  
 

 ......   
  

  
  
Alig confidence  ..........................


































......












Template Conservation                                        
         
   
                           
Template Sequence  PPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHSDDNKKALKIRLEAYHTQTTPLVE
Template Known Secondary structure  GGGTT
S


ST





T







Template Predicted Secondary structure 


























Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   243......250.........260.........270..
Predicted Secondary structure 










Query SS confidence 





























Query Sequence  LYRKNQIPWINSTNYSVEEIATKILDIMGL
Query Conservation 
  
   





 






  

  
  
Alig confidence 





























Template Conservation            

     


   
   
 
Template Sequence  YYSKRGIHSAIDASQTPDVVFASILAAFSK
Template Known Secondary structure  TT
TTS
Template Predicted Secondary structure 







Template SS confidence 





























   201........210.........220.........230
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions