Job Description P0A8A4 Confidence 93.91% Date Thu Jan 5 11:07:19 GMT 2012 Rank 59 Aligned Residues 113 % Identity 17% Template c3nwjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:atsk2; PDBTitle: crystal structure of shikimate kinase from arabidopsis thaliana2 (atsk2) Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	L	L	G	V	S	R	C	G	K	T	P	T	S	L	Y	L	A	M	Q	F	G	I	R	A	A	N	Y	P	F	I	A	D	D	M	D	N	L	V	L	P	A	S	L	K	P	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	Y	L	V	G	M	M	G	S	G	K	T	T	V	G	K	I	M	A	R	S	L	G	Y	T	F	F	D	C	D	T	L	I	E	Q	A	M	K	G	T	S	V	A	E	I	F	E	H	F	G	E	S	V	F	R	E	K	E	T	E	A	L	K	K	L	S	L	M	Y	H	Q	V	V	V	S	T	G	G	G	A
Template Known Secondary structure							S	T	T	S														T															T	T																																S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
														202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.												.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	H	K	L	F	G	L	T	I	D	P	E	R	L	A	A	I	R	E	E	R	R	E	N	S	R	Y	A	S	L	R	Q	C	R	M	E	V	A	E	V	E	A	L	Y	R	K	N	Q	I	P	W	.	.	.	.	.	.	.	.	.	.	.	I	N	S	T	N	Y	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.
Template Sequence		V	I	R	P	I	N	W	K	Y	M	H	K	G	I	S	I	W	L	D	V	P	L	E	A	L	A	H	R	I	T	Y	T	A	A	L	.	.	.	.	.	.	N	R	L	S	T	I	W	D	A	R	G	E	A	Y	T	K	A	S	A	R	V	S	L	E	N	I	T	L	K	L	G	Y	R	S	V	S	D	L	T
Template Known Secondary structure		G	S	S								T	T	S																							.	.	.	.	.	.															T	T	S	S													T		S		G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	I	A	T	K	I	L	D	I	M	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	E	I	A	I	E	A	F	E	Q	V	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions