Job Description P0A8A4 Confidence 84.07% Date Thu Jan 5 11:07:19 GMT 2012 Rank 80 Aligned Residues 70 % Identity 14% Template c3eihB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas Resolution 3.25 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		D	P	T	P	I	A	H	R	T	H	G	L	N	P	N	N	L	N	K	Y	D	A	R	I	.	A	A	I	D	Y	T	L	A	H	D	D	G	I	S	L	R	N	L	D	Q	A	Q	V	I	L	L	G	V	S	R	C	G	K	T	P	T	S	L	Y	L	A	M	Q	F	G	I	R	A	A	N	Y
Query Conservation																										.
Alig confidence														.	.	.	.	.								.
Template Conservation														.	.	.	.	.
Template Sequence		K	P	N	V	K	W	E	D	V	A	G	L	.	.	.	.	.	E	G	A	K	E	A	L	K	E	A	V	I	L	P	V	K	F	P	H	L	F	K	G	N	R	K	P	T	S	G	I	L	L	Y	G	P	P	G	T	G	K	S	Y	L	A	K	A	V	A	T	E	A	N	S	T	F	F	S	V
Template Known Secondary structure							S	T	T	S		S		.	.	.	.	.												T						G	G	G			T	T												S	T	T	S												T	T	T
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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