Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8A4
Confidence40.51%DateThu Jan 5 11:07:19 GMT 2012
Rank186Aligned Residues184
% Identity15%Templatec3dmdA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90 .........100.........110.........120...
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Query Sequence  ESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQ. . DIVQALVAPLQQEMKLDPTPIAHRTHGLNPNNL
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Template Sequence  REKLKSFVKRVEEEVEKEEEEVELTVEIKEKDVDKALDELEIDLLEADVALEVVDALREKIKQKLVGKKVRIGTDK. . . .
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   6...10.........20.........30.........40.........50.........60.........70.........80.
 
   124.....130.........140.........150.. .......160.........170.........180.........190......
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Query Sequence  NKYDARIAAIDYTLAHDDGISLRNLDQAQ. . . . . . . VILLGVSRCGKTPTSLYLAMQFGIRAANYPFIADDMDNLVLPAS
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Template Sequence  GKIIEEAVKEAVSEILETSRRIDLIEEIRKAEKPYVIMFVGFNGSGKTTTIAKLANW. . . . . . . . . . . . . . . . . . . . . . .
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   90.........100.........110.........120.........130.........140......
 
   197..200.........210.........220.. .......230... ......240.........250........
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Query Sequence  LKPLQHKLFGLTIDPERLAAIREERR. . . . . . . . . . ENSRYASLRQC. RMEVAEVEALYRKNQIPWINSTNYS
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Template Sequence  LKNHGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAK. . ARGIDVVLIDTAGRS
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   147..150.........160.........170.........180.........190.........200.. .......210.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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