Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8A4
Confidence95.04%DateThu Jan 5 11:07:19 GMT 2012
Rank51Aligned Residues83
% Identity22%Templatec3crqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: structure of trna dimethylallyltransferase: rna2 modification through a channel
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170.........180. ........190.........200.........210.........220...
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Query Sequence  VILLGVSRCGKTPTSLYLAMQFGIRAANY. . . . . . . . . PFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRE
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Template Sequence  IFLMGPTAAGKTDLAMALADALPCELISVDSALIYRGMDIGT. . . . AKPSRELLARYPHRLIDIR. . . . . . . . . . . . . DP
Template Known Secondary structure 
STTSSTTS


TTTTBTT

TTT....T


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   8.10.........20.........30.........40......... 50.........60........ .70
 
   224.....230.........240.........250..
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Query Sequence  NSRYASLRQCRMEVAEVEALYRKNQIPWI
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Template Sequence  AESYSAAEFRADALAAMAKATARGRIPLL
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TT
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   71........80.........90.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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