Job Description P0A8A4 Confidence 54.93% Date Thu Jan 5 11:07:19 GMT 2012 Rank 125 Aligned Residues 104 % Identity 15% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		146	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		R	N	L	D	Q	A	Q	V	I	L	L	.	G	V	S	R	C	G	K	T	P	T	S	L	Y	L	A	M	Q	F	G	I	R	A	A	N	Y	P	F	I	A	D	D	M	D	N	L	V	L	P	A	S	L	K	P	L	Q	H	K	L	F	G	L	T	I	D	P	E	R	L	A	A	I	R	E	E	R	R	E	N
Query Conservation													.
Alig confidence													.																		.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	.	M	S	D	N	D	D	V	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	T	A	G	S
Template Known Secondary structure		S	S	B		S	S									S	S	S	S												.				T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S														S
Template Predicted Secondary structure																															.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.																					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.									.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		S	R	Y	A	S	L	R	Q	C	R	.	.	.	.	.	.	.	.	M	E	V	A	E	V	E	A	L	Y	R	K	N	Q	I	P	W	I	N	S	T	N	Y	S	V	E	E	I	A	T	K	I	L	D	I	M
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	A	Q	K	I	K	A	A	R	R	D	F	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K
Template Known Secondary structure									T	T	G	G	G	T			S														T	S								S	S		B
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions