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Job DescriptionP0A8A4
Confidence97.84%DateThu Jan 5 11:07:19 GMT 2012
Rank2Aligned Residues117
% Identity21%Templatec3akcA_
PDB info PDB header:transferaseChain: A: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of cmp kinase in complex with cdp and adp from2 thermus thermophilus hb8
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170.........180
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Query Sequence  VILLGVSRCGKTPTSLYLAMQFGIRAAN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VTIDGPSASGKSSVARRVAAALGVPYLSSGLLYRAAAFLALRAGVDPGDEEGLLALLEGLGVRLLAQAEGNRVLADGEDL
Template Known Secondary structure 
STTSST

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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   181........190.........200.........210.........220......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIREERRENSR
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Template Sequence  TSFLHTPEVDRVVSAVARLPGVRAWVNRRLKEVPPPFVAE. . . GRDMGTAVFPEAAHKFYLTASPEVRAWRRARERPQAY
Template Known Secondary structure  GGGSSST
TS
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   85....90.........100.........110.........120.... .....130.........140.........150.........160.
 
   227..230..... ....240.........250.........260.........270..
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Query Sequence  YASLRQCRM. EVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGL
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Template Sequence  EEVLRDLLRRDERDKAQSAPAPDALVLDTGGMTLDEVVAWVLAHIRR
Template Known Secondary structure  TGGG



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   162.......170.........180.........190.........200........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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