Job Description P0A8A4 Confidence 95.12% Date Thu Jan 5 11:07:19 GMT 2012 Rank 50 Aligned Residues 118 % Identity 14% Template c2ql6H_ PDB info PDB header:signaling protein,transferase Chain: H: PDB Molecule:nicotinamide riboside kinase 1; PDBTitle: human nicotinamide riboside kinase (nrk1) Resolution 2.70 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																			180	.	.																													.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	L	L	G	V	S	R	C	G	K	T	P	T	S	L	Y	L	A	M	Q	F	G	I	R	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	A	D
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	I	S	G	V	T	N	S	G	K	T	T	L	A	K	N	L	Q	K	H	L	P	N	C	S	V	I	S	Q	D	D	F	F	K	P	E	S	E	I	E	T	D	K	N	G	F	L	Q	Y	D	V	L	E	A	L	N	X	E	K	X	X	S	A	I	S	C	W	X	E	S	A	R	H	I	P	I	L	I	I
Template Known Secondary structure							S	T	T	S	S												S	T	T						G	G	G	G	B			G	G	G			B		T	T	S		B			S	S	G	G	G	B																	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.				230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.
Predicted Secondary structure																																													.	.	.																										.
Query SS confidence																																													.	.	.																										.
Query Sequence		D	M	D	N	L	V	L	P	A	S	L	K	P	L	Q	H	K	L	F	G	L	T	I	D	P	E	R	L	A	A	I	R	E	E	R	R	E	N	S	R	Y	A	S	.	.	.	L	R	Q	C	R	M	E	V	A	E	V	E	A	L	Y	R	K	N	Q	I	P	W	I	N	S	.	T	N	Y	S	V	E	E	I
Query Conservation																																													.	.	.																										.
Alig confidence																																													.	.	.																										.
Template Conservation
Template Sequence		E	G	F	L	L	F	N	Y	K	P	L	D	T	I	W	N	R	S	Y	F	L	T	I	P	Y	E	E	C	K	R	R	R	S	T	R	V	Y	Q	P	P	D	S	P	G	Y	F	D	G	H	V	W	P	X	Y	L	K	Y	R	Q	E	X	Q	D	I	T	W	E	V	V	Y	L	D	G	T	K	S	E	E	D	L
Template Known Secondary structure				S	S		T	T						T	T		S																	T	T	S			S	S				T	T					T											T	T	T	T			S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	K	I	L	D	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	Q	V	Y	E	D	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions