Job Description P0A8A4 Confidence 96.64% Date Thu Jan 5 11:07:19 GMT 2012 Rank 24 Aligned Residues 117 % Identity 15% Template c2plrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:probable thymidylate kinase; PDBTitle: crystal structure of dtmp kinase (st1543) from sulfolobus tokodaii2 strain7 Resolution 1.60 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																								.	.	.								.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.								.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	L	L	G	V	S	R	C	G	K	T	P	T	S	L	Y	L	A	M	Q	F	.	.	.	G	I	R	A	A	N	Y	.	.	.	.	.	P	F	I	A	D	D	M	D	N	L	V	L	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.								.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.								.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	F	E	G	I	D	G	S	G	K	S	S	Q	A	T	L	L	K	D	W	I	E	L	K	R	D	V	Y	L	T	E	S	D	W	I	H	D	I	I	K	E	A	K	K	K	D	L	L	T	P	L	T	F	S	L	I	H	A	T	D	F	S	D	R	Y	E	R	Y	I	L	P	X	L	K	S	G	F	I	V
Template Known Secondary structure								T	T	S	S													T	T	T	S																				T	T																						T							T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
																													196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.												.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	K	P	L	Q	H	K	L	F	G	L	T	I	D	P	E	R	L	A	A	I	R	E	E	R	R	E	N	.	.	.	.	.	.	.	.	.	.	.	S	R	Y	A	S	L	R	Q	C	R	M	E	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	D	R	Y	I	Y	T	A	Y	A	R	D	S	V	R	G	V	D	I	D	W	V	K	K	L	Y	S	F	A	I	K	P	D	I	T	F	Y	I	R	V	S	P	D	I	A	L	E	R	I	K	K	S	K	R	K	I	K	P	Q	E	A	G	A	D	I	F	P	G	L	S	P	E	E	G	F	L	K	Y	Q
Template Known Secondary structure				S	S											T	T	T										T	T	T	S				S																	T	T	T	T					T	T	T	T	T	T	T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		A	E	V	E	A	L	Y	R	K	N	.	.	.	.	Q	I	P	W	I	N	S	T	N	Y	S	V	E	E	I	A	T	K	I	L	D	I	M
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.							.
Template Conservation																						.
Template Sequence		G	L	I	T	E	V	Y	D	K	L	V	K	D	E	N	F	I	V	I	D	.	G	T	K	T	P	K	E	I	Q	I	Q	I	R	K	F	V
Template Known Secondary structure												T	T	T	T	T						.	T	T	S
Template Predicted Secondary structure																						.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions