 |
Job Description | P0A8A4 | Confidence | 24.01% | Date | Thu Jan 5 11:07:19 GMT 2012 |
Rank | 280 | Aligned Residues | 85 |
% Identity | 19% | Template | c2iuuE_ |
PDB info |
PDB header:membrane protein | Chain: E: PDB Molecule:dna translocase ftsk; |
PDBTitle: p. aeruginosa ftsk motor domain, hexamer
|
Resolution | 2.9 Å |
|
 |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | Q | A | Q | V | I | L | L | G | V | S | R | C | G | K | T | P | T | S | L | Y | . |
. |
. |
. |
. |
L | A | M | Q | F | G | I | R | A | A | N | Y | P | F | I | A | D | D | M | D | N | L | V | L | P | A | S | L | K | P | L | Q | H | K | L | F | G | L | T | I | D | P | E | R | L | A | A | I | R | E | E | R | R | E |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
| . | . | . | . | . |
|
|   |
|   |
|   |
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
| . |   |   |
|   |
|
|
|   |
|
|   |   |   | . | . |   |   |
|   |   |
|   |
|   |
|
|
|
|
|   |   |
|
| . |   |   |   |   |   |
|
|
|
|   |   |   |
|   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . |
Template Sequence |   |
K | M | P | H | L | L | V | A | G | T | T | G | S | G | K | S | . |
V | G | V | N | A | M | L | L | S | I | L | F | K | . |
. |
S | T | P | S | E | A | R | L | I | M | I | D | P | K | M | L | E | L | . |
S | I | Y | E | G | I | P | H | L | L | C | P | V | V | T | D | M | K | E | A | A | N | A | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
G | S |
| S |  |  |  |  |
|
| T | T | S | S |  |  | . |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . |
|
| T | T | T |  |  |  |  |  |  |
| S | S | S | S | G | G | . | G | G | G | T | T |
| T | T | B | S | S | S |
| B |
| S |  |  |  |  |  |  |  | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
458 | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | |
. | . | . | . | . | . | 480 | . | . | . | . | . | . | |
|
. | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | |
. | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | |
|
|
|
|
|
  |
  |   |
224 | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | S | R | Y | A | S | L | R | Q | C | R | M | E | V | A | E | V | E | A | L | Y | R | K | N | Q | I |
Query Conservation |   |
  |
|   |
|
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |   |
|   |   |   |
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |
|   |   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |   |
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
L | R | W | S | V | A | E | M | E | R | R | Y | R | L | M | A | A | M | G | V |
Template Known Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
528 | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|