Job Description P0A8A4 Confidence 23.13% Date Thu Jan 5 11:07:19 GMT 2012 Rank 290 Aligned Residues 159 % Identity 7% Template c1uquB_ PDB info PDB header:synthase Chain: B: PDB Molecule:alpha, alpha-trehalose-phosphate synthase; PDBTitle: trehalose-6-phosphate from e. coli bound with udp-glucose. Resolution 2.0 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.																		140	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	A	L	V	A	P	L	Q	Q	E	M	K	L	D	P	.	.	.	.	.	.	.	T	P	I	A	H	R	T	H	G	L	N	P	N	N	L	N	K	Y	D	A	R	I	A	A	I	D	Y	T	L	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	G	I	S	L	R	N	L
Query Conservation																		.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G	R	I	N	G	K	Y	G	Q	L	G	W	T	P	L	Y	Y	L	N	Q	H	F	D	R	K	L	L	M	K	I	F
Template Known Secondary structure																	G	G	G	T	T	T												T	T	S	S		T	T																			B	T	T	B		S						S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		D	Q	A	Q	V	I	L	L	G	V	S	R	C	G	K	T	P	T	S	L	Y	L	A	M	Q	F	G	I	.	R	A	A	N	Y	P	F	I	A	D	D	M	D	N	L	V	L	P	A	S	L	K	P	L	Q	H	K	L	F	G	L	T	I	D	P	E	R	L	A	A	I	R	E	E	R	R	E	N	S	R	Y
Query Conservation																														.
Alig confidence										.																				.											.	.	.											.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation										.																															.	.	.											.	.	.	.	.	.																.	.	.	.	.	.	.
Template Sequence		R	Y	S	D	V	G	L	V	.	T	P	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L	S	Q	.	.	.	F	A	G	A	A	N	E	L	T	S	.	.	.	.	.	.	A	L	I	V	N	P	Y	D	R	D	E	V	A	A	A	.	.	.	.	.	.	.
Template Known Secondary structure					S					.			S	S	B	S												S		T	T	S								T	.	.	.	T	B	G	G	G	G	T		T	T	.	.	.	.	.	.	S					T	T									.	.	.	.	.	.	.
Template Predicted Secondary structure										.																															.	.	.											.	.	.	.	.	.																.	.	.	.	.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.				.	.	.	390	.	.	.	.	.	.							.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	R	Q	C	R	M	E	V	A	E	V	E	A	L	Y	R	K	N	Q	I	P	W	I	N	S	T	N	Y	S	V	E	E	I	A	T	K	I	L	D	I	M	G	L
Query Conservation
Alig confidence		.	.																							.	.
Template Conservation		.	.																							.	.
Template Sequence		.	.	L	D	R	A	L	T	M	S	L	A	E	R	I	S	R	H	A	E	M	L	D	V	.	.	I	V	K	N	D	I	N	H	W	Q	E	C	F	I	S	D	L	K	Q
Template Known Secondary structure		.	.						T																	.	.				T
Template Predicted Secondary structure		.	.																							.	.
Template SS confidence
				412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.			.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions