|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | V | T | F | H | T | N | H | G | D | I | V | I | K | T | F | D | D | K | A | P | E | T | V | K | N | F | L | D | Y | C | R | E | G | F | Y | N | N | T | I | F | H | R | V | I | N | G | F | M | I | Q | G | G | G | F | E | P | G | M | K | Q | K | A | T | . |
. |
K | E | P | I | K | N | E | A | N | N | G | L | K | N |
Query Conservation |   |
  |
|   |   |   |
|
|   |
|   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|   |
|   |
|   |
|
|
|   |   |   |   |
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | A | I | I | H | T | S | M | G | D | I | H | T | K | L | F | P | V | E | C | P | K | T | V | E | N | F | C | V | H | S | R | N | G | Y | Y | N | G | H | T | F | H | R | I | I | K | G | F | M | I | Q | T | G | D | P | T | G | T | G | M | G | G | E | S | I | W | G | G | E | F | E | D | E | F | H | S | T | L | R | H |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
| T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T |
| B |
|
|  |  |  | T | T | T |  |  |  |  |
|
| T | T | S | S | S | S |
|
|
|
| T | T | S | S |
| B |
|
|
|
|
| T | T |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
493 | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | G | T | L | A | M | A | R | T | Q | A | P | H | S | A | T | A | Q | F | F | I | N | V | V | D | N | D | F | L | N | F | S | G | E | S | L | Q | G | W | G | Y | C | V | F | A | E | V | V | D | G | M | D | V | V | D | K | I | K | G | V | A | T | G | R | S | G | M | H | Q | D | V | P | K | E | D | V | I | I | E |
Query Conservation |   |
  |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |   | . | . | . | . | . | . | . | . |   |   |
|
|
|   |
|   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |
|   |   |   |
|   |
|   |
Template Sequence |   |
D | R | P | Y | T | L | S | M | A | N | A | G | S | N | T | N | G | S | Q | F | F | I | T | V | V | P | T | P | W | L | D | N | K | . |
. |
. |
. |
. |
. |
. |
. |
H | T | V | F | G | R | V | T | K | G | M | E | V | V | Q | R | I | S | N | V | K | V | N | P | . |
. |
. |
K | T | D | K | P | Y | E | D | V | S | I | I |
Template Known Secondary structure |   |
| S | S | S |  |  |  |  |
|
| S | S | T | T |
| B |
| S |
|  |  |  |  | S | S |
|
| G | G | G | T | T | T | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | T | S |
| B |
| T | . | . | . | T | T |
|
| B | S | S |
|
| B |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
573 | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | |
|
|
630 | . | . | . | . | . | . | . | . | . | 640 | . |
  |
  |   |
159 | 160 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
S | V | T | V | S |
Query Conservation |   |
  |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
Template Sequence |   |
N | I | T | V | K |
Template Known Secondary structure |   |
 |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
  |   |
642 | . | . | . | . |
  |