Return to main results Retrieve Phyre Job Id

Job DescriptionP23869
Confidence100.00%DateThu Jan 5 11:40:07 GMT 2012
Rank6Aligned Residues152
% Identity35%Templated2a2na1
SCOP infoCyclophilin-like Cyclophilin-like Cyclophilin (peptidylprolyl isomerase)
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.... .....70........
Predicted Secondary structure 
































..













Query SS confidence 































































. .













Query Sequence  MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKAT. . KEPIKNEANNGLKN
Query Conservation   
   

 
 
 


    

  
 

  
     
    
 

     

 
           ..              
Alig confidence 































































..













Template Conservation   
   

 
 
 


    

    

  
   
 
      

      
 
                           
Template Sequence  SAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRH
Template Known Secondary structure  TT
TTT
TTTTTT
B

TTT

TTSSSS



TTSS
B




TT

S
Template Predicted Secondary structure 













































Template SS confidence 















































































   493......500.........510.........520.........530.........540.........550.........560.........570..
 
   7980.........90.........100.........110.........120.........130.........140.........150........
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIE
Query Conservation    
 
            


 
 
     
            



 

 
  

  
    
         
   
 
 
Alig confidence 
































........























...











Template Conservation     
          
  


 
 
     

  ........  


 
  
 


  
       ...    
   
 
 
Template Sequence  DRPYTLSMANAGSNTNGSQFFITVVPTPWLDNK. . . . . . . . HTVFGRVTKGMEVVQRISNVKVNP. . . KTDKPYEDVSII
Template Known Secondary structure 
SSS

SSTT
B
S
SS

GGGTTT........S

TS
B
T...TT

BSS

B
Template Predicted Secondary structure 




















........







...







Template SS confidence 















































































   573......580.........590.........600..... ....610.........620......... 630.........640.
 
   159160...
Predicted Secondary structure 
Query SS confidence 




Query Sequence  SVTVS
Query Conservation     
 
Alig confidence 




Template Conservation     
 
Template Sequence  NITVK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   642....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions