Return to main results Retrieve Phyre Job Id

Job DescriptionP23869
Confidence100.00%DateThu Jan 5 11:40:07 GMT 2012
Rank7Aligned Residues151
% Identity30%Templatec3bo7D_
PDB info PDB header:isomerase/immunosuppressantChain: D: PDB Molecule:peptidyl-prolyl cis-trans isomerase cyclophilin-type; PDBTitle: crystal structure of toxoplasma gondii peptidyl-prolyl cis-trans2 isomerase, 541.m00136
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.... .....70...
Predicted Secondary structure 































........








Query SS confidence 






























































. . . . . . . .








Query Sequence  VTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKAT. . . . . . . . KEPIKNEAN
Query Conservation 
   

 
 
 


    

  
 

  
     
    
 

     

 
           ........         
Alig confidence 






























































........








Template Conservation 
 
 
  
 
 
 
     
 
  

  
     
    
 

     

 
                            
Template Sequence  LRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPQQSPRSISGFPGGAPFEDEFD
Template Known Secondary structure  TT
TTT
TTTTTTT
BTTT

GGG





SS


SSTT


B




Template Predicted Secondary structure 













































Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.........80........
 
   74.....80.........90.........100.........110.........120.........130.........140.........150...
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  NGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKE
Query Conservation         
 
            


 
 
     
            



 

 
  

  
    
         
  
Alig confidence 





































........

























....



Template Conservation          
 
           




     
 

  ........  


 
  
  

  
        
.... 
  
Template Sequence  NRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNK. . . . . . . . HTIFGRVVGGLDVLRQWEKLETDKKD. . . . KPLK
Template Known Secondary structure  TT



STT

SSTT
BSS
SS

GGGTTT........S

T

B
TTS....
BSS
Template Predicted Secondary structure 
























........









....



Template SS confidence 















































































   95....100.........110.........120.........130.. .......140.........150........ .160..
 
   154.....160....
Predicted Secondary structure 

Query SS confidence 










Query Sequence  DVIIESVTVSE
Query Conservation   
 
    
  
Alig confidence 










Template Conservation   
 
    

 
Template Sequence  PPKVEEIIVFK
Template Known Secondary structure 

B
Template Predicted Secondary structure 

Template SS confidence 










   163......170...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions