Job Description P23869 Confidence 100.00% Date Thu Jan 5 11:40:07 GMT 2012 Rank 25 Aligned Residues 151 % Identity 29% Template c1z81A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:cyclophilin; PDBTitle: crystal structure of cyclophilin from plasmodium yoelii. Resolution 2.80 Å

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		2	.	.	.	.	.						.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.									.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.																												.	.	.	.	.	.	.	.																																		.
Query SS confidence								.	.	.	.	.																												.	.	.	.	.	.	.	.																																		.
Query Sequence		V	T	F	H	T	N	.	.	.	.	.	H	G	D	I	V	I	K	T	F	D	D	K	A	P	E	T	V	K	N	F	L	D	Y	C	R	E	G	.	.	.	.	.	.	.	.	F	Y	N	N	T	I	F	H	R	V	I	N	G	F	M	I	Q	G	G	G	F	E	P	G	M	K	Q	K	A	T	K	E	P	.
Query Conservation								.	.	.	.	.																												.	.	.	.	.	.	.	.																																		.
Alig confidence								.	.	.	.	.																												.	.	.	.	.	.	.	.																																		.
Template Conservation
Template Sequence		V	F	M	D	I	N	L	G	N	N	F	L	G	K	F	K	F	E	L	F	Q	N	I	V	P	K	T	S	E	N	F	R	Q	F	C	T	G	E	Y	K	V	N	N	L	P	V	G	Y	K	N	T	I	F	H	R	V	I	K	E	F	M	I	Q	G	G	D	F	I	N	H	N	G	S	G	S	L	S	I	Y	G
Template Known Secondary structure									T	T												T	T	T														T			B	S	S	S	S	B		S	S	T	T								T	T	T							T	T	T	S	S	S					B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
			68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.																																																															.	.
Query SS confidence		.																																																															.	.
Query Sequence		.	I	K	N	E	A	N	N	G	L	K	N	T	R	G	T	L	A	M	A	R	T	Q	A	P	H	S	A	T	A	Q	F	F	I	N	V	V	D	N	D	F	L	N	F	S	G	E	S	L	Q	G	W	G	Y	C	V	F	A	E	V	V	D	G	.	.	M	D	V	V	D	K	I	K	G	V	A	T	G	R	S
Query Conservation		.																																																															.	.
Alig confidence		.																																													.	.	.	.	.	.	.	.											.	.															.
Template Conservation																																															.	.	.	.	.	.	.	.																											.
Template Sequence		E	K	F	D	D	E	N	F	D	I	K	H	D	K	E	G	L	L	S	M	A	N	S	G	P	N	T	N	G	C	Q	F	F	I	T	T	K	K	C	E	W	L	D	G	K	.	.	.	.	.	.	.	.	N	V	V	F	G	R	I	I	D	N	D	S	L	L	L	L	K	K	I	E	N	V	S	V	T	P	.
Template Known Secondary structure		S									S				S	T	T							S	S	S	S				S						S	S			G	G	G	B	T	T	.	.	.	.	.	.	.	.	B								S													S		B		T	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.																											.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	H	Q	D	V	P	K	E	D	V	I	I	E	S	V	T	V	S
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	Y	I	Y	K	P	K	I	P	I	N	V	V	E	C	G	E	L
Template Known Secondary structure		.	.	T	T			B	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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