 |
Job Description | Q46820 | Confidence | 98.83% | Date | Thu Jan 5 12:34:45 GMT 2012 |
Rank | 266 | Aligned Residues | 90 |
% Identity | 26% | Template | d1lvla2 |
SCOP info | FAD/NAD(P)-binding domain
| FAD/NAD(P)-binding domain
| FAD/NAD-linked reductases, N-terminal and central domains
|
Resolution | 2.45 |
|
 |
  |   |
306 | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | P | R | S | E | K | V | A | V | I | G | A | G | P | A | G | L | G | C | A | D | I | L | A | R | A | G | V | Q | V | D | V | F | D | R | H | P | E | I | G | G | M | L | T | F | G | I | P | P | F | K | L | D | K | T | V | L | S | Q | R | R | E | I | F | T | A | M | G | I | D | F | H | L | N | C | E | I | G | R |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |
|
|
|   |
|
|   |   |   |   |
|
|   |
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
P | K | A | L | P | Q | H | L | V | V | V | G | G | G | Y | I | G | L | E | L | G | I | A | Y | R | K | L | G | A | Q | V | S | V | V | E | A | R | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | I | L | P | T | Y | D | S | E | L | T | A | P | V | A | E | S | L | K | K | L | G | I | A | L | H | L | G | H | S | V | E | G |
Template Known Secondary structure |   |
| S | S |
|
| S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
| S | S | S | . | . | . | . | . | . | . | . | . | S | S | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
386 | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | I | T | F | S | D | L | T | S | E | Y | D | A | V | F | I | G | V | G |
Query Conservation |   |
. | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|
|   |
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|   |
|
Template Sequence |   |
Y | E | N | G | C | L | L | A | N | D | G | K | G | G | Q | L | R | L | E | A | D | R | V | L | V | A | V | G |
Template Known Secondary structure |   |
 |  | T | T |  |  |  |  |  |
| S | S | S |
|
|
|  |  |
|
| S |
|  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|