Job Description Q46820 Confidence 99.97% Date Thu Jan 5 12:34:45 GMT 2012 Rank 31 Aligned Residues 296 % Identity 18% Template c3r9uA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: thioredoxin-disulfide reductase from campylobacter jejuni. Resolution 2.36 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.									.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.
Query Sequence		K	V	A	V	I	G	A	G	P	A	G	L	G	C	A	D	I	L	A	R	A	G	V	Q	V	D	V	F	D	R	H	P	E	I	G	G	M	L	T	F	.	.	.	.	.	.	.	.	G	I	P	P	F	K	L	D	K	T	V	L	S	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C	E	I
Query Conservation																																										.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	A	I	I	G	G	G	P	A	G	L	S	A	G	L	Y	A	T	R	G	G	L	K	N	V	V	X	F	E	K	G	X	P	G	G	Q	I	T	S	S	S	E	I	E	N	Y	P	G	V	A	Q	V	X	D	G	I	S	F	X	A	P	W	S	E	Q	C	X	R	F	G	L	K	H	E	X	V	G	V	E
Template Known Secondary structure									S														T		S							S	S	S	T	T	G	G	G	G	G		S		B			S	T	T			S		B														T	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	D	I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G	G	G	D	T	T
Query Conservation
Alig confidence					.	.	.	.																																									.	.
Template Conservation					.	.	.	.																																									.	.
Template Sequence		Q	I	L	.	.	.	.	K	N	S	D	G	S	F	T	I	K	L	E	G	G	K	T	E	L	A	K	A	V	I	V	C	T	G	S	A	P	K	K	A	G	F	K	G	E	D	E	.	.	F	F	G	K	G	V	S	T	C	A	T	C	D	G	F	F	Y	K	N	K	E	V	A	V	L	G	G	G	D	T	A
Template Known Secondary structure					.	.	.	.			T	T	S							T	T	S																						B	T	T	T	T	.	.	T	B	T	T	T			S						G	G	G	G	T	T	S								B
Template Predicted Secondary structure					.	.	.	.																																									.	.
Template SS confidence
		83	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	C	L	R	T	S	I	R	L	N	A	A	S	V	T	C	A	Y	R	R	D	E	V	S	M	P	G	S	R	K	E	V	V	N	A	R	E	E	G	V	E	F	Q	F	N	V	Q	P	Q	Y	I	A	C	D	E	D	G	R	L	T	A	V	G	L	I	R	T	A	M	G	E	P	G	P	D	G	R	R	R
Query Conservation
Alig confidence														.										.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.										.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	E	A	L	Y	L	A	N	I	C	S	.	K	I	Y	L	I	H	R	R	D	.	E	F	R	A	A	P	S	T	V	E	K	V	K	K	N	E	K	I	E	L	I	T	S	A	S	V	D	E	V	Y	G	D	K	X	G	V	A	G	V	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	S	S	.							S	S	S	.	S		B	S												T	T						S										T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.										.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.				.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.																																									.
Query SS confidence																															.	.	.																																									.
Query Sequence		P	R	P	V	A	G	S	E	F	E	L	P	A	D	V	L	I	M	A	F	G	F	Q	A	H	A	M	P	W	.	.	.	L	Q	G	S	G	I	K	L	D	K	W	G	L	I	Q	T	G	D	V	G	Y	L	P	T	Q	T	H	L	K	K	V	F	A	G	G	D	A	V	H	G	.	A	D	L	V	V	T	A
Query Conservation																															.	.	.																																									.
Alig confidence		.																													.	.	.																				.	.	.	.																		.
Template Conservation		.																																																			.	.	.	.
Template Sequence		.	K	L	K	D	G	S	I	R	D	L	N	V	P	G	I	F	T	F	V	G	L	N	V	R	N	E	I	L	K	Q	D	D	S	K	F	L	C	N	X	E	E	G	G	Q	V	S	V	D	L	K	.	.	.	.	X	Q	T	S	V	A	G	L	F	A	A	G	D	L	R	K	D	A	P	K	Q	V	I	C	A
Template Known Secondary structure		.			T	T	S								S						S							G	G	G	B		T	T	S		B	S	S		B		T	T	S		B				T	T	.	.	.	.		B		S	S	T	T					G	G	G	B	T	T
Template Predicted Secondary structure		.																																																			.	.	.	.
Template SS confidence
			219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	A	G	R	Q	A	A	R	D	M	L	T	L	F	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	D	G	A	V	A	A	L	S	A	X	A	Y	I	E	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions