 |
Job Description | Q46820 | Confidence | 97.01% | Date | Thu Jan 5 12:34:45 GMT 2012 |
Rank | 386 | Aligned Residues | 90 |
% Identity | 24% | Template | c3prjB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:udp-glucose 6-dehydrogenase; |
PDBTitle: role of packing defects in the evolution of allostery and induced fit2 in human udp-glucose dehydrogenase.
|
Resolution | 3.10 Å |
|
 |
  |   |
311 | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | |
|
. | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | V | A | V | I | G | A | G | P | A | G | L | G | C | A | D | I | L | A | R | A | G | V | Q | . |
. |
V | D | V | F | D | R | H | P | E | I | G | G | M | L | T | F | G | I | P | P | F | K | L | D | K | T | V | L | S | Q | R | R | E | I | F | T | A | M | G | I | D | F | H | L | N | C | E | I | G | R | D | I | T |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |   | . | . |
|
|
|   |
|
|   |   |   |   |
|
|   |
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
Template Conservation |   |
|
|
|   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |
|
|
| . | . |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
| . | . | . | . | . | . | . | . |   |
Template Sequence |   |
K | K | I | C | C | I | G | A | G | Y | V | G | G | P | T | C | S | V | I | A | H | M | C | P | E | I | R | V | T | V | V | D | V | N | E | S | R | I | N | A | W | N | S | P | T | L | P | I | Y | E | P | G | . |
. |
L | K | E | V | V | E | S | C | R | G | K | N | L | F | F | S | T | . |
. |
. |
. |
. |
. |
. |
. |
N |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S | T | T |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  | S | S | S |
| S | S |
|
| T | T | . | . |  |  |  |  |  |  |  |  | B | T | T | T |  |  |  |  | S | . | . | . | . | . | . | . | . |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
| . | . | . | . | . | . | . | . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
|
|
|
. |
  |
  |   |
389 | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | S | D | L | T | S | E | Y | D | A | V | F | I | G | V | G | T | Y | G | M | M | R |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|
|
|   |
|
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |   |
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |
Template Sequence |   |
I | D | D | A | I | K | E | A | D | L | V | F | I | S | V | N | T | P | T | K | T | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
| S |  |  |  |  |
|
|
|
|
| B |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|