Job Description Q46820 Confidence 100.00% Date Thu Jan 5 12:34:45 GMT 2012 Rank 20 Aligned Residues 262 % Identity 23% Template c3oc4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, pyridine nucleotide-disulfide family; PDBTitle: crystal structure of a pyridine nucleotide-disulfide family2 oxidoreductase from the enterococcus faecalis v583 Resolution 2.60 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																							.	.																																																						.	.	.	.
Query SS confidence																							.	.																																																						.	.	.	.
Query Sequence		K	V	A	V	I	G	A	G	P	A	G	L	G	C	A	D	I	L	A	R	A	.	.	G	V	Q	V	D	V	F	D	R	H	P	E	I	G	G	M	L	T	F	G	I	P	P	F	K	L	D	K	T	V	L	S	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C	E	I	G	R	.	.	.	.
Query Conservation																							.	.																																																						.	.	.	.
Alig confidence																							.	.																								.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	I	I	G	A	S	F	A	G	I	S	A	A	I	A	S	R	K	K	Y	P	Q	A	E	I	S	L	I	D	K	Q	A	T	V	G	Y	L	S	G	R	Y	I	T	E	.	.	.	.	.	.	.	.	.	.	.	.	E	E	L	R	R	Q	K	I	Q	L	L	L	N	R	E	V	V	A	X	D	V	E
Template Known Secondary structure									S															S	S	S							S	S	S			S	S									.	.	.	.	.	.	.	.	.	.	.	.						T	T						S								T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.													.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
								386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	D	I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G	G
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																					.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	L	I	A	W	T	R	K	E	E	Q	Q	W	Y	S	Y	D	K	L	I	L	A	T	G	A	.	S	Q	F	S	T	Q	I	R	G	S	Q	T	E	K	L	L	K	Y	K	F	L	S	A	V	P	L	L	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	T	V	A	V	I	G	A
Template Known Secondary structure		T	T							T	T								S									.		B						B	T	T	T		T	T				G	G	G									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																												.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																.	.	.	.	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.						.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		G	D	T	T	M	D	C	L	R	T	S	I	R	L	N	A	A	S	V	T	C	A	Y	R	R	D	E	V	S	M	P	G	S	R	K	E	V	V	N	A	R	E	.	.	.	.	.	E	G	V	E	F	Q	F	N	V	Q	P	Q	Y	I	A	C	D	E	D	G	R	L	T	A	V	G	L	I	R	T	A	M	G
Query Conservation																																												.	.	.	.	.
Alig confidence																		.																										.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	I	G	X	E	A	I	D	F	L	V	K	X	K	K	.	T	V	H	V	F	E	S	L	E	N	L	L	P	K	Y	F	D	K	E	X	V	A	E	V	Q	K	S	L	E	K	Q	A	V	I	F	H	F	E	E	T	V	L	G	I	E	E	T	A	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S													T	T		.							S	S	S	S	S	S	T	T	T															T	T	T						T										S	S		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		E	P	G	P	D	G	R	R	R	P	R	P	V	A	G	S	E	F	E	L	P	A	D	V	L	I	M	A	F	G	F	Q	A	H	A	M	P	W	L	Q	G	S	G	I	K	L	D	K	W	G	L	I	Q	T	G	D	V	G	Y	L	P	T	Q	T	H	L	K	K	V	F	A	G	G	D	A	V	H	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																													.	.																		.	.	.	.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																													.	.																		.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	I	V	L	E	T	S	E	Q	E	I	S	C	D	S	G	I	F	A	L	N	L	H	P	Q	L	A	Y	L	.	.	D	K	K	I	Q	R	N	L	D	Q	T	I	A	V	D	A	Y	.	.	.	.	L	Q	T	S	V	P	N	V	F	A	I	G	D	C	I	S	V	X	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.						S	S						S						S			B				S	S		.	.		T	T	S		B		T	T	S		B				T	T	.	.	.	.		B		S	S	T	T					G	G	G	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																													.	.																		.	.	.	.
Template SS confidence
												220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
									612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	A	D	L	V	V	T	A	M	A	A	G	R	Q	A	A	R	D	M	L
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	V	A	E	T	F	Y	A	P	L	V	N	N	A	V	R	T	G	L	V	V	A	N	N	L	E
Template Known Secondary structure		G	G	G	T																			T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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