Job Description Q46820 Confidence 99.98% Date Thu Jan 5 12:34:45 GMT 2012 Rank 23 Aligned Residues 262 % Identity 25% Template c3kd9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:coenzyme a disulfide reductase; PDBTitle: crystal structure of pyridine nucleotide disulfide oxidoreductase from2 pyrococcus horikoshii Resolution 2.75 Å

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		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																								.	.																																																						.	.	.
Query SS confidence																								.	.																																																						.	.	.
Query Sequence		E	K	V	A	V	I	G	A	G	P	A	G	L	G	C	A	D	I	L	A	R	A	.	.	G	V	Q	V	D	V	F	D	R	H	P	E	I	G	G	M	L	T	F	G	I	P	P	F	K	L	D	K	T	V	L	S	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C	E	I	G	R	.	.	.
Query Conservation																								.	.																																																						.	.	.
Alig confidence																								.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	V	V	I	I	G	G	G	A	A	G	M	S	A	A	S	R	V	K	R	L	K	P	E	W	D	V	K	V	F	E	A	T	E	W	V	S	E	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	K	K	R	G	I	D	L	H	L	N	A	E	V	I	E	V	D	T
Template Known Secondary structure										S															T	T	S							S	S	S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T						T								T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
							386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	D	I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G	G	G
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																					.																																.	.	.	.	.	.	.	.	.
Template Conservation																											.																																.	.	.	.	.	.	.	.	.
Template Sequence		G	Y	V	R	V	R	E	N	G	G	E	K	S	Y	E	W	D	Y	L	V	F	A	N	G	A	.	S	P	Q	V	P	A	I	E	G	V	N	L	K	G	V	F	T	A	D	L	P	P	D	A	L	A	I	R	E	Y	M	.	.	.	.	.	.	.	.	.	E	K	Y	K	V	E	N	V	V	I	I	G	G	G
Template Known Secondary structure		T							T	T								S									.							S	B				S	T	T				S		S												.	.	.	.	.	.	.	.	.	T	T	S											S
Template Predicted Secondary structure																											.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.										.	.	.	.	.	.	150	.	.	.	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.					.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		D	T	T	M	D	C	L	R	T	S	I	R	L	N	A	A	S	V	T	C	A	Y	R	R	D	E	V	S	M	P	G	S	R	K	E	V	V	N	A	R	E	.	.	.	.	E	G	V	E	F	Q	F	N	V	Q	P	Q	Y	I	A	C	D	E	D	G	R	L	T	A	V	G	L	I	R	T	A	M	G	E	P
Query Conservation																																											.	.	.	.
Alig confidence																	.																										.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	G	I	E	M	A	E	A	F	A	A	Q	G	K	.	N	V	T	M	I	V	R	G	E	R	V	L	R	R	S	F	D	K	E	V	T	D	I	L	E	E	K	L	K	K	H	V	N	L	R	L	Q	E	I	T	M	K	I	E	G	E	E	R	V	E	K	V	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T	T		.							S	S	S	S	T	T	T	T	T	S													T	T	T	S					S								B	S	S	S	B				.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		G	P	D	G	R	R	R	P	R	P	V	A	G	S	E	F	E	L	P	A	D	V	L	I	M	A	F	G	F	Q	A	H	A	M	P	W	L	Q	G	S	G	I	K	L	D	K	W	G	L	I	Q	T	G	D	V	G	Y	L	P	T	Q	T	H	L	K	K	V	F	A	G	G	D	A	V	H	G	A	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.																					.	.	.	.																			.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																								.																					.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	V	T	D	A	G	E	Y	K	A	E	L	V	I	L	A	T	G	I	K	P	N	I	E	.	L	A	K	Q	L	G	V	R	I	G	E	T	G	A	I	W	T	N	E	K	.	.	.	.	M	Q	T	S	V	E	N	V	Y	A	A	G	D	V	A	E	T	R	H	V	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.			T	T						S						S								.				T	T	T			B		T	T	S	S	B				T	T	.	.	.	.		B		S	S	T	T					G	G	G	B				B	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.																					.	.	.	.
Template SS confidence
													225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
									614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	D	L	V	V	T	A	M	A	A	G	R	Q	A	A	R	D	M	L
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	R	R	V	W	V	P	L	A	P	A	G	N	K	M	G	Y	V	A	G	S	N	I	A
Template Known Secondary structure		T		S																						T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions