Phyre 2 alignment of Q46820 with c3fg2P

Job Description Q46820
Confidence 99.96% Date Thu Jan 5 12:34:45 GMT 2012

Rank 57 Aligned Residues 279

% Identity 19% Template c3fg2P_

PDB info PDB header:oxidoreductase Chain: P: PDB Molecule:putative rubredoxin reductase; PDBTitle: crystal structure of ferredoxin reductase for the cyp199a2 system from2 rhodopseudomonas palustris

Resolution 2.20 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.					.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																									.	.													.	.	.	.
Query SS confidence																									.	.													.	.	.	.
Query Sequence	K	V	A	V	I	G	A	G	P	A	G	L	G	C	A	D	I	L	A	R	A	G	V	Q	.	.	V	D	V	F	D	R	H	P	E	I	G	G	.	.	.	.	M	L	T	F	G	I	P	P	F	K	L	D	K	T	V	L	S	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C	E	I	G	R
Query Conservation																									.	.													.	.	.	.
Alig confidence																									.	.													.	.	.	.
Template Conservation
Template Sequence	T	V	L	I	A	G	A	G	H	A	G	F	Q	V	A	V	S	L	R	Q	A	K	Y	P	G	R	I	A	L	I	N	D	E	K	H	L	P	Y	Q	R	P	P	L	S	K	A	Y	L	K	S	G	G	D	P	N	S	L	M	F	R	P	E	K	F	F	Q	D	Q	A	I	E	L	I	S	D	R	M	V	S	I
Template Known Secondary structure								S													T	T			S								S	S	S	S	S	B		S	G	G	G	G	T	G	G	G	G	S				T	T	S	S	B	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
	3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

	386							.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence	D	.	.	.	.	.	.	I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G	G
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																				.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence	D	R	E	G	R	K	L	L	L	A	S	G	T	A	I	E	Y	G	H	L	V	L	A	T	G	A	.	R	N	R	M	L	D	V	P	N	A	S	L	P	D	V	L	Y	L	R	T	L	D	E	S	E	V	L	R	Q	.	.	.	.	.	.	.	.	.	.	.	R	M	P	D	K	K	H	V	V	V	I	G	A
Template Known Secondary structure		T	T	T	T					S	S	S						S									.							S	T	T	T	T	S	T	T					S	S										.	.	.	.	.	.	.	.	.	.	.		G	G	G		S
Template Predicted Secondary structure																											.																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.												.	.	140	.	.	.	.	.	.	.	.	.	150

	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.						.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence	G	D	T	T	M	D	C	L	R	T	S	I	R	L	N	A	A	S	V	T	C	A	Y	R	R	D	E	V	S	M	P	G	S	R	K	E	V	V	N	.	.	.	.	.	A	R	E	E	G	V	E	F	Q	F	N	V	Q	P	Q	Y	I	A	C	D	E	D	G	R	L	T	A	V	G	L	I	R	T	A	M	G
Query Conservation																																								.	.	.	.	.
Alig confidence																	.																							.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence	G	F	I	G	L	E	F	A	A	T	A	R	A	K	G	L	.	E	V	D	V	V	E	L	A	P	R	V	M	A	R	V	V	T	P	E	I	S	S	Y	F	H	D	R	H	S	G	A	G	I	R	M	H	Y	G	V	R	A	T	E	I	A	A	E	G	D	R	V	T	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	S													T	T		.							S	S	S	S	T	T	T	T	T	S															T	T						S										T	T				.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

	535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	P	G	P	D	G	R	R	R	P	R	P	V	A	G	S	E	F	E	L	P	A	D	V	L	I	M	A	F	G	F	Q	A	H	A	M	P	W	L	Q	G	S	G	I	K	L	D	K	W	G	L	I	Q	T	G	D	V	G	Y	L	P	T	Q	T	H	L	K	K	V	F	A	G	G	D	A	V	H	G	A	D
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.	.	.																										.										.	.											.	.	.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.																										.										.	.											.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	G	V	V	L	S	D	G	N	T	L	P	C	D	L	V	V	V	G	V	G	V	I	P	N	V	.	E	I	A	A	A	A	G	L	P	.	.	T	A	A	G	I	I	V	D	Q	Q	.	.	.	.	L	L	T	S	D	P	H	I	S	A	I	G	D	C	A	L	F	E	S
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.					T	T	S						S													.						T	T			.	.	B	S	S	S					T	T	.	.	.	.	S	B		S	S	T	T					G	G	G
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.																										.										.	.											.	.	.	.
Template SS confidence
											219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

											615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	L	V	V	T	A	M	A	A	G	R	Q	A	A	R	D	M	L
Query Conservation	.	.	.	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	V	R	F	G	E	T	M	R	V	E	S	V	Q	N	A	T	D	Q	A	R	C	V	A	A	R	L	T
Template Known Secondary structure	T	T	T	T							S															T	T
Template Predicted Secondary structure
Template SS confidence
	282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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