Job Description Q46820 Confidence 98.96% Date Thu Jan 5 12:34:45 GMT 2012 Rank 232 Aligned Residues 191 % Identity 16% Template c3d4oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dipicolinate synthase subunit a; PDBTitle: crystal structure of dipicolinate synthase subunit a (np_243269.1)2 from bacillus halodurans at 2.10 a resolution Resolution 2.10 Å

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		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.			.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		R	S	E	K	V	A	V	I	G	A	G	P	A	G	L	G	C	A	D	I	L	A	R	A	G	V	Q	V	D	V	.	.	F	D	R	H	P	E	I	G	G	M	L	T	F	G	I	P	P	F	K	L	D	K	T	V	L	S	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C	E	I	G	R	D
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		T	G	K	H	V	V	I	I	G	G	D	A	R	Q	L	E	I	I	R	K	L	S	T	F	D	A	K	I	S	L	V	G	F	D	Q	L	D	F	I	G	V	T	K	X	R	I	D	E	V	D	W	N	T	V	D	A	I	L	L	P	I	S	G	T	N	E	A	G	K	V	D	T	I	F	S	N	E	S	I	V
Template Known Secondary structure		T	T								B														T	T							S		T	T				T	T						G	G	G			G	G	G		S						T	T				T	T		B			B	S	S		S				B
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.						.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	.	.	.	.	.	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G	G	G	D
Query Conservation																																																											.	.	.	.	.
Alig confidence																																																											.	.	.	.	.
Template Conservation
Template Sequence		L	T	E	E	X	I	E	K	T	P	N	H	C	V	V	Y	S	G	I	S	N	T	Y	L	N	Q	C	X	K	K	T	N	R	T	L	V	K	L	X	E	R	D	D	I	A	I	Y	N	S	I	P	T	A	E	G	T	I	X	X	A	I	Q	H	T	D	F	T	I	H	G	A	N	V	A	V	L	G	L	G	R
Template Known Secondary structure									T	S		T	T						S	S													T						G	G	G																									S	S		S	T	T									S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	M	D	C	L	R	T	S	I	R	L	N	A	A	S	V	T	C	A	Y	R	R	D	E	V	S	M	P	G	S	R	K	E	V	V	N	A	R	E	E	G	V	E	F	Q	F
Query Conservation
Alig confidence																.										.	.	.	.	.	.	.	.
Template Conservation																.										.	.	.	.	.	.	.	.
Template Sequence		V	G	X	S	V	A	R	K	F	A	A	L	G	A	.	K	V	K	V	G	A	R	E	S	.	.	.	.	.	.	.	.	D	L	L	A	R	I	A	E	X	G	X	E	P	F	H
Template Known Secondary structure													T	T		.							S	S		.	.	.	.	.	.	.	.									T	T	S
Template Predicted Secondary structure																.										.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions