Job Description Q46820 Confidence 99.96% Date Thu Jan 5 12:34:45 GMT 2012 Rank 69 Aligned Residues 298 % Identity 20% Template c3ctyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of t. acidophilum thioredoxin reductase Resolution 2.35 Å

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		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		P	R	S	E	K	V	A	V	I	G	A	G	P	A	G	L	G	C	A	D	I	L	A	R	A	G	V	Q	V	D	V	F	D	R	H	P	E	I	G	G	M	L	T	F	G	.	I	P	P	F	K	L	D	K	T	V	L	S	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C	E	I	G	R	D
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		E	R	D	F	D	V	V	I	V	G	A	G	A	A	G	F	S	A	A	V	Y	A	A	R	S	G	F	S	V	A	I	L	D	K	A	V	A	G	G	L	T	A	E	A	P	L	V	E	N	Y	L	G	F	K	S	I	V	G	S	E	L	A	K	L	F	A	D	H	A	A	N	Y	A	K	I	R	E	G	V	E
Template Known Secondary structure													S													T	T								S	S	S	T	T	G	G	G	G	G		S		B			B	T	T	B	S	S	B															T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G	G	G	D	T	T	M	D	C
Query Conservation
Alig confidence																														.	.	.
Template Conservation																														.	.	.
Template Sequence		V	R	S	I	K	K	T	Q	G	G	F	D	I	E	T	N	D	D	T	Y	H	A	K	Y	V	I	I	T	.	.	.	T	G	T	T	H	K	H	L	G	V	K	G	E	S	E	Y	F	G	K	G	T	S	Y	C	S	T	C	D	G	Y	L	F	K	G	K	R	V	V	T	I	G	G	G	N	S	G	A	I	A
Template Known Secondary structure									T	T							S	S	S											.	.	.											B	T	T	T	T	T	B	T	T	T			S						G	G	G	G	B	T	S								S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	T	S	I	R	L	N	A	A	S	V	T	C	A	Y	R	R	D	E	V	S	M	P	G	S	R	K	E	V	V	N	A	R	E	E	G	V	E	F	Q	F	N	V	Q	P	Q	Y	I	A	C	D	E	D	G	R	L	T	A	V	G	L	I	R	T	A	M	G	E	P	G	P	D	G	R	R	R	P	R	P
Query Conservation
Alig confidence											.											.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.											.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	S	M	S	E	Y	V	K	.	N	V	T	I	I	E	Y	M	P	K	.	.	Y	M	C	E	N	A	Y	V	Q	E	I	K	K	R	N	I	P	Y	I	M	N	A	Q	V	T	E	I	V	G	D	G	K	K	V	T	G	V	K	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R
Template Known Secondary structure						T	T	T	B	S	.							S	S	S	S	.	.			S											T	T						S									S	S	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure											.											.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																	230	.
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.		.	.	.	.	.	.	620	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		V	A	G	S	E	F	E	L	P	A	D	V	L	I	M	A	F	G	F	Q	A	H	A	M	P	W	L	Q	G	S	G	I	K	L	D	K	W	G	L	I	Q	T	G	D	V	G	Y	L	P	T	Q	T	H	L	K	K	V	F	A	G	G	D	A	V	H	G	A	.	D	L	V	V	T	A	M	A	A	G	R	Q
Query Conservation																																																																					.
Alig confidence																									.																						.	.	.	.																			.
Template Conservation																									.																						.	.	.	.
Template Sequence		T	T	G	E	E	K	L	I	E	T	D	G	V	F	I	Y	V	G	L	I	P	Q	T	.	S	F	L	K	D	S	G	V	K	L	D	E	R	G	Y	I	V	V	D	S	R	.	.	.	.	Q	R	T	S	V	P	G	V	Y	A	A	G	D	V	T	S	G	N	F	A	Q	I	A	S	A	V	G	D	G	C	K
Template Known Secondary structure		T	T									S													.	G	G	G	T	T	S				B		T	T	S		B				T	T	.	.	.	.		B		S	S	T	T					S	T	T	B	T	T
Template Predicted Secondary structure																									.																						.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		626	.	.	.	630	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	R	D	M	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	L	S	L	Y	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions