Job Description Q46820 Confidence 99.97% Date Thu Jan 5 12:34:45 GMT 2012 Rank 24 Aligned Residues 279 % Identity 16% Template c2v3aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:rubredoxin reductase; PDBTitle: crystal structure of rubredoxin reductase from pseudomonas2 aeruginosa. Resolution 2.4 Å

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		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																											.	.													.	.	.																		.
Query SS confidence																											.	.													.	.	.																		.
Query Sequence		E	K	V	A	V	I	G	A	G	P	A	G	L	G	C	A	D	I	L	A	R	A	G	V	Q	.	.	V	D	V	F	D	R	H	P	E	I	G	G	.	.	.	M	L	T	F	G	I	P	P	F	K	L	D	K	T	V	L	S	.	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C	E	I	G
Query Conservation																											.	.													.	.	.																		.
Alig confidence																											.	.													.	.	.																		.
Template Conservation
Template Sequence		A	P	L	V	I	I	G	T	G	L	A	G	Y	N	L	A	R	E	W	R	K	L	D	G	E	T	P	L	L	M	I	T	A	D	D	G	R	S	Y	S	K	P	M	L	S	T	G	F	S	K	N	K	D	A	D	G	L	A	M	A	E	P	G	A	M	A	E	Q	L	N	A	R	I	L	T	H	T	R	V	T
Template Known Secondary structure										S												T	T		S	S	S							S	S							G	G	G	G	G	G	T	T	T	T	T																		T	T						S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
								385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	R	D	I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																						.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	D	P	G	H	Q	R	I	W	I	G	E	E	E	V	R	Y	R	D	L	V	L	A	W	G	A	.	E	P	I	R	V	P	V	E	G	D	A	Q	D	A	L	Y	P	I	N	D	L	E	D	Y	A	R	F	R	Q	.	.	.	.	.	.	.	.	.	.	.	A	A	A	G	K	R	R	V	L	L	L	G
Template Known Secondary structure					G	G	G	T					T	T						S									.								B	S	T	T	T	T						S	S										.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																													.																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140												.	.	.	.	.	.	.	.	.	150	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.						.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		G	G	D	T	T	M	D	C	L	R	T	S	I	R	L	N	A	A	S	V	T	C	A	Y	R	R	D	E	V	S	M	P	G	S	R	K	E	V	V	N	A	R	E	.	.	.	.	.	E	G	V	E	F	Q	F	N	V	Q	P	Q	Y	I	A	C	D	E	D	G	R	L	T	A	V	G	L	I	R	T	A	M
Query Conservation																																													.	.	.	.	.
Alig confidence																			.																										.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	L	I	G	C	E	F	A	N	D	L	S	S	G	G	Y	.	Q	L	D	V	V	A	P	C	E	Q	V	M	P	G	L	L	H	P	A	A	A	K	A	V	Q	A	G	L	E	G	L	G	V	R	F	H	L	G	P	V	L	A	S	L	K	K	A	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S													T	T		.							S	S	S	S	S	S	T	T	T	S														T	T	T						S										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		G	E	P	G	P	D	G	R	R	R	P	R	P	V	A	G	S	E	F	E	L	P	A	D	V	L	I	M	A	F	G	F	Q	A	H	A	M	P	W	L	Q	G	S	G	I	K	L	D	K	W	G	L	I	Q	T	G	D	V	G	Y	L	P	T	Q	T	H	L	K	K	V	F	A	G	G	D	A	V	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																												.												.	.									.	.	.	.																.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																												.												.	.									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	L	E	A	H	L	S	D	G	E	V	I	P	C	D	L	V	V	S	A	V	G	L	R	P	R	T	.	E	L	A	F	A	A	G	L	A	V	N	.	.	R	G	I	V	V	D	R	S	.	.	.	.	L	R	T	S	H	A	N	I	Y	A	L	G	D	C	A	E	V	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.							T	T	S						S						S							.						T	T			B	S	.	.	S	S					T	T	.	.	.	.		B		S	S	T	T					G	G	G				T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																												.												.	.									.	.	.	.
Template SS confidence
											219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
			611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	H	G	A	D	L	V	V	T	A	M	A	A	G	R	Q	A	A	R	D	M	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	L	N	L	L	Y	V	M	P	L	M	A	C	A	R	A	L	A	Q	T	L	A
Template Known Secondary structure		T	B				S																T
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions