Job Description Q46820 Confidence 99.97% Date Thu Jan 5 12:34:45 GMT 2012 Rank 25 Aligned Residues 277 % Identity 19% Template c2gr2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin reductase; PDBTitle: crystal structure of ferredoxin reductase, bpha4 (oxidized form) Resolution 1.85 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																												.	.																																																		.	.	.
Query SS confidence																												.	.																																																		.	.	.
Query Sequence		S	E	K	V	A	V	I	G	A	G	P	A	G	L	G	C	A	D	I	L	A	R	A	G	V	Q	.	.	V	D	V	F	D	R	H	P	E	I	G	G	M	L	T	F	G	I	P	P	F	K	L	D	K	T	V	L	S	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C	E	I	G	.	.	.
Query Conservation																												.	.																																																		.	.	.
Alig confidence																												.	.																																																		.	.	.
Template Conservation
Template Sequence		K	A	P	V	V	V	L	G	A	G	L	A	S	V	S	F	V	A	E	L	R	Q	A	G	Y	Q	G	L	I	T	V	V	G	D	E	A	E	R	P	Y	D	R	P	P	L	S	K	D	F	M	A	H	G	D	A	E	K	I	R	L	D	C	K	R	A	P	E	V	E	W	L	L	G	V	T	A	Q	S	F	D
Template Known Secondary structure			S	S							S														T			S							S	S		S			B		S	G	G	G	G	T								G	G	G	S	B				T	T	S		S						T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
					385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	R	D	I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G	G	G	D
Query Conservation		.	.	.
Alig confidence		.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	A	H	T	V	A	L	S	D	G	R	T	L	P	Y	G	T	L	V	L	A	T	G	A	A	P	R	A	L	P	T	L	Q	G	A	T	M	P	V	H	T	L	R	T	L	E	D	A	R	R	I	Q	A	.	.	.	.	.	.	.	.	.	.	.	G	L	R	P	Q	S	R	L	L	I	V	G	G	G	V
Template Known Secondary structure		T	T	T	T					T	T	S						S														G	G	G	T	T		S	S						S	S									T	.	.	.	.	.	.	.	.	.	.	.	T			T	T									S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140												.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.						.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		T	T	M	D	C	L	R	T	S	I	R	L	N	A	A	S	V	T	C	A	Y	R	R	D	E	V	S	M	P	G	S	R	K	E	V	V	N	.	.	.	.	.	A	R	E	E	G	V	E	F	Q	F	N	V	Q	P	Q	Y	I	A	C	D	E	D	G	R	L	T	A	V	G	L	I	R	T	A	M	G	E	P
Query Conservation																																							.	.	.	.	.
Alig confidence																.																							.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	L	E	L	A	A	T	A	R	T	A	G	V	.	H	V	S	L	V	E	T	Q	P	R	L	M	S	R	A	A	P	A	T	L	A	D	F	V	A	R	Y	H	A	A	Q	G	V	D	L	R	F	E	R	S	V	T	G	S	V	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T		.							S	S	S	S	S		T	T	T	S															T	T						T								T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		G	P	D	G	R	R	R	P	R	P	V	A	G	S	E	F	E	L	P	A	D	V	L	I	M	A	F	G	F	Q	A	H	A	M	P	W	L	Q	G	S	G	I	K	L	D	K	W	G	L	I	Q	T	G	D	V	G	Y	L	P	T	Q	T	H	L	K	K	V	F	A	G	G	D	A	V	H	G	A	D	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.	.	.	.	.	.																										.												.	.									.	.	.	.																				.	.
Template Conservation		.	.	.	.	.	.	.	.																										.												.	.									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	V	L	L	D	D	G	T	R	I	A	A	D	M	V	V	V	G	I	G	V	L	A	N	D	.	A	L	A	R	A	A	G	L	A	C	D	.	.	D	G	I	F	V	D	A	Y	.	.	.	.	G	R	T	T	C	P	D	V	Y	A	L	G	D	V	T	R	Q	R	N	P	L
Template Known Secondary structure		.	.	.	.	.	.	.	.					T	T	S						S						S							.							T			B	S	.	.	S	S					T	T	.	.	.	.		B		S	S	T	T					G	G	G						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																										.												.	.									.	.	.	.
Template SS confidence
										217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260					.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
										615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	L	V	V	T	A	M	A	A	G	R	Q	A	A	R	D	M	L
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	R	F	E	R	I	E	T	W	S	N	A	Q	N	Q	G	I	A	V	A	R	H	L	V
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions