Job Description Q46820 Confidence 97.71% Date Thu Jan 5 12:34:45 GMT 2012 Rank 353 Aligned Residues 134 % Identity 17% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		K	V	V	P	R	S	E	K	V	A	V	I	G	A	G	P	A	G	L	G	C	.	A	D	I	L	A	R	A	G	V	Q	V	D	V	F	D	R	H	P	E	I	G	G	M	L	T	F	G	I	P	P	F	K	L	D	K	T	V	L	S	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C	E	I
Query Conservation																							.
Alig confidence																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		P	E	X	R	R	V	R	H	I	H	F	V	G	I	G	G	A	G	X	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	T	Q	Q	L	X	N	L	G	A	T	I	Y	F	N	.	.	.
Template Known Secondary structure					T	T								T	T	T	S	T	T											T	T								S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T					S	S	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		G	R	D	I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G	G	G	D	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Conservation		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	H	R	P	E	N	V	R	D	A	S	V	V	V	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	I	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	E	L	X	R	F	R	H	G	I	A	I	A	G	T	H	G	K
Template Known Secondary structure		.	.	.	.			G	G	G	G	T	T		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			T	T										T	T															T	T	S							S	S	S
Template Predicted Secondary structure		.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						71	.	.	.	.	.	.	.	.	80	.	.	.	.	.																	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
			462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	T	T	M	D	C	L	R	T	S	I	R	L	N	A	A	S	V	T	C	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		T	T	T	T	A	X	V	S	S	I	Y	A	E	A	G	L	D	P	T	F	V
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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