Job Description Q46820 Confidence 99.57% Date Thu Jan 5 12:34:45 GMT 2012 Rank 144 Aligned Residues 298 % Identity 15% Template c1yvvB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:amine oxidase, flavin-containing; PDBTitle: x-ray structurure of p. syringae q888a4 oxidoreductase at2 resolution 2.5a. northeast structural genomics consortium3 target psr10. Resolution 2.50 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.											.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	A	V	I	G	A	G	P	A	G	L	G	C	A	D	I	L	A	R	A	G	V	Q	V	D	V	F	D	R	H	P	E	I	G	G	.	.	.	.	.	.	.	.	.	.	M	L	T	F	G	I	P	P	F	K	L	D	K	T	V	L	S	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C
Query Conservation																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	A	I	I	G	T	G	I	A	G	L	S	A	A	Q	A	L	T	A	A	G	H	Q	V	H	L	F	D	K	S	R	G	S	G	G	R	X	S	S	K	R	S	D	A	G	A	L	D	X	G	A	Q	Y	F	T	A	R	D	R	R	F	A	T	A	V	K	Q	W	Q	A	Q	G	H	V	A	E	W	T	P
Template Known Secondary structure									S													T	T								S	S	S	S	S		G	G	G						T	T	S					S				B				S														T	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	G	R	D	I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G	G	G	D
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		L	L	Y	.	N	F	H	A	G	R	L	S	P	S	P	D	E	Q	V	R	W	V	G	K	P	G	X	S	A	I	T	R	A	X	R	G	D	X	P	V	S	F	S	C	R	I	T	E	V	F	R	G	E	E	H	W	N	L	L	D	A	E	G	Q	N	H	G	P	F	S	H	V	I	I	A	T	P	A	P	Q
Template Known Secondary structure					.			S	S	S							S	S	S						S	S	S	T	T								T	T						S										S	S							T	T	S							S						S
Template Predicted Secondary structure					.
Template SS confidence
		84	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	M	D	C	L	R	T	S	I	R	L	N	A	A	S	V	T	C	A	Y	R	R	D	E	V	S	M	P	G	S	R	K	E	V	V	N	A	R	E	E	G	V	E	F	Q	F	N	V	Q	P	Q	Y	I	A	C	D	E	D	G	R	L	T	A	V	G	L	I	R	T	A	M	G	E	P	G	P	D	G	R
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	L	A	A	A	P	K	L	A	S	V	V	A	G	V	K	X	D	P	T	W	A	V	A	L	A	F	E	T	P	L	Q	T	P	X	Q	G	C	F	V	Q	D	S	P	L	D	W	L	A	R	N	R	S
Template Known Secondary structure			G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	T									T	T														S	S			S		S								S	S	S							G	G	G
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.																									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.																		.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	P	R	P	V	A	G	S	E	F	E	L	P	A	D	V	L	I	M	A	F	G	F	Q	A	H	A	M	P	W	L	Q	G	S	G	I	K	L	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	G	L	I	Q	T	G	D	V	G	Y	L	P	T	Q	T	H	L	K	K	V	F
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	E	R	D	D	T	L	D	T	W	I	L	H	A	T	S	Q	W	S	R	Q	N	L	D	A	S	R	E	Q	V	I	E	H	L	H	G	A	F	A	E	L	I	D	C	T	X	P	A	P	V	F	S	L	A	H	R	W	L	Y	A	R	P	A	G	A	H	E	W	G	A	L	S	D	A	D	L	G	I	Y
Template Known Secondary structure		S	T	T				S	S															T	T	T																T	T		S	S						S													S	S					S					T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		605	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	G	D	A	V	H	G	A	D	L	V	V	T	A	M	A	A	G	R	Q	A	A	R	D	M	L	T	L	F	D
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		V	C	G	D	W	C	L	S	G	R	.	V	E	G	A	W	L	S	G	Q	E	A	A	R	R	L	L	E	H	L	Q
Template Known Secondary structure					G	G	G	T	T	S	S	.																			T	T
Template Predicted Secondary structure												.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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