Job Description Q46820 Confidence 99.94% Date Thu Jan 5 12:34:45 GMT 2012 Rank 86 Aligned Residues 269 % Identity 24% Template c1xhcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh oxidase /nitrite reductase; PDBTitle: nadh oxidase /nitrite reductase from pyrococcus furiosus pfu-1140779-2 001 Resolution 2.35 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																						.	.	.																																						.	.	.	.
Query SS confidence																																						.	.	.																																						.	.	.	.
Query Sequence		K	V	A	V	I	G	A	G	P	A	G	L	G	C	A	D	I	L	A	R	A	G	V	Q	V	D	V	F	D	R	H	P	E	I	G	G	.	.	.	M	L	T	F	G	I	P	P	F	K	L	D	K	T	V	L	S	Q	R	R	E	I	F	T	A	M	G	I	D	F	H	L	N	C	E	I	G	.	.	.	.
Query Conservation																																						.	.	.																																						.	.	.	.
Alig confidence																						.																.	.	.																																						.	.	.	.
Template Conservation																						.
Template Sequence		K	V	V	I	V	G	N	G	P	G	G	F	E	L	A	K	Q	L	S	Q	.	T	Y	E	V	T	V	I	D	K	E	P	V	P	Y	Y	S	K	P	M	L	S	H	Y	I	A	G	F	I	P	R	N	R	L	F	P	Y	S	L	D	W	Y	R	K	R	G	I	E	I	R	L	A	E	E	A	K	L	I	D	R
Template Known Secondary structure									S											T	T	.	T	S							S	S	S	S					S	T	T						T	T	S	S		G	G	G	G		S	S									T						S								T
Template Predicted Secondary structure																						.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
				385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	D	I	T	F	S	D	L	T	S	E	Y	D	A	V	F	I	G	V	G	T	Y	G	M	M	R	A	D	L	P	H	E	D	A	P	G	V	I	Q	A	L	P	F	L	T	A	H	T	R	Q	L	M	G	L	P	E	S	E	E	Y	P	L	T	D	V	E	G	K	R	V	V	V	L	G	G	G	D	T
Query Conservation		.	.
Alig confidence		.	.																						.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	K	V	V	I	T	E	K	G	E	V	P	Y	D	T	L	V	L	A	T	G	A	.	R	A	R	E	P	Q	I	K	G	K	E	Y	L	L	T	L	R	T	I	F	D	A	D	R	I	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	E	N	S	G	E	A	I	I	I	G	G	G	F	I
Template Known Secondary structure		T	T	T					S	S						S									.							S	B	T	G	G	G						S										.	.	.	.	.	.	.	.	.	.	.	.	.						S								S
Template Predicted Secondary structure																									.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130														.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490				.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		T	M	D	C	L	R	T	S	I	R	L	N	A	A	S	V	T	C	A	Y	R	R	D	E	V	S	M	P	.	.	.	G	S	R	K	E	V	V	N	A	R	E	E	G	V	E	F	Q	F	N	V	Q	P	Q	Y	I	A	C	D	E	D	G	R	L	T	A	V	G	L	I	R	T	A	M	G	E	P	G	P	D
Query Conservation																														.	.	.
Alig confidence															.															.	.	.																										.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.																																											.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	E	L	A	G	N	L	A	E	A	G	Y	.	H	V	K	L	I	H	R	G	A	M	F	L	G	L	D	E	E	L	S	N	M	I	K	D	M	L	E	E	T	G	V	K	F	F	L	N	S	E	L	L	E	A	.	.	N	E	E	G	V	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T		.							S	S	S			T	T																T	T						S							.	.		S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.																																											.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.					.	.	.
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		G	R	R	R	P	R	P	V	A	G	S	E	F	E	L	P	A	D	V	L	I	M	A	F	G	F	Q	A	H	A	M	P	W	L	Q	G	S	G	I	K	L	D	K	W	G	L	I	Q	T	G	D	V	G	Y	L	P	T	Q	T	H	L	K	K	V	F	A	G	G	D	A	V	H	G	.	.	.	.	A	D	L
Query Conservation																																																																											.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																					.												.	.									.	.	.	.																		.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																					.												.	.									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	N	S	G	F	I	E	G	K	V	K	I	C	A	I	G	I	V	P	N	V	.	D	L	A	R	R	S	G	I	H	T	G	.	.	R	G	I	L	I	D	D	N	.	.	.	.	F	R	T	S	A	K	D	V	Y	A	I	G	D	C	A	E	Y	S	G	I	I	A	G	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T						S													.						T	T			B	S	.	.	S	S					T	T	.	.	.	.	S	B		S	S	T	T					G	G	G			B	T	T	B				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																					.												.	.									.	.	.	.
Template SS confidence
												209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	T	A	M	A	A	G	R	Q	A	A	R	D	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	A	A	M	E	Q	A	R	V	L	A	D	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions