Return to main results Retrieve Phyre Job Id

Job DescriptionP45761
Confidence99.95%DateThu Jan 5 12:03:38 GMT 2012
Rank2Aligned Residues132
% Identity24%Templated3ci0j1
SCOP infoPili subunits Pili subunits EpsJ-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70... ......80.........90....... ..100.........110...
Predicted Secondary structure 






..........

















..






Query SS confidence 



























. . . . . . . . . .























. .















Query Sequence  QQFNQLQRTITILDNDLLQLVARRNRST. . . . . . . . . . DKIMVLGEEAIFTTQSRDPLAPLS. . EAQTLLTVHWYLRNHT
Query Conservation          
   
 


  
        ..........                        ..    
  
 
 
    
Alig confidence 



























..........























..















Template Conservation 


  



   

 

 
 
 
  
   
        
   
 
    
 
 
 

 

    


 



 


    
Template Sequence  QKLNLXQQTXSFLTHDLTQXXPRPVRGDQGQREPALLAGAGVLASESEGXRFVRGGVVNPLXRLPRSNLLTVGYRIHDGY
Template Known Secondary structure 
TTB




TTS

SSTGGG
SS




TT

SS

S
TT
Template Predicted Secondary structure 












































Template SS confidence 















































































   3940.........50.........60.........70.........80.........90.........100.........110........
 
   114.....120....... ..130.........140.... .....150.........160.........170.......
Predicted Secondary structure 






.






........
















Query SS confidence 













.
















. . . . . . . .
































Query Sequence  LYRAVRTSVDGRKD. QPAQAMLEHVESFLLES. . . . . . . . NSGESQELPLSVTLHLQTQQYGGLQRRFALPEQ
Query Conservation 
 
      
    .     

  
       ........       

 





     
   
 
 

  
Alig confidence 













.
















........
































Template Conservation 
 
     

      
    
  
     

     
   
     

 



 
 
   
 
 


 
 
 
Template Sequence  LERLAWPLTDAAGSVKPTXQKLIPADSLRLQFYDGTRWQESWSSVQAIPVAVRXTLHSPQWGEIERIWLLRGP
Template Known Secondary structure  SSSS

TT



S

SS
S



SS


STTTSS

Template Predicted Secondary structure 
































Template SS confidence 








































































   119120.........130.........140.........150.........160.........170.........180.........190.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions