Job Description P45761 Confidence 99.95% Date Thu Jan 5 12:03:38 GMT 2012 Rank 3 Aligned Residues 131 % Identity 31% Template c3njeA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:general secretion pathway protein j; PDBTitle: structure of the minor pseudopilin xcpw from the pseudomonas2 aeruginosa type ii secretion system Resolution 1.85 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		Q	K	E	I	Q	Q	F	N	Q	L	Q	R	T	I	T	I	L	D	N	D	L	L	Q	L	V	A	R	R	N	R	S	T	D	K	I	M	V	L	G	.	.	.	.	.	.	E	E	A	I	F	T	T	Q	S	R	D	P	L	A	P	L	S	E	A	Q	T	L	L	T	V	H	W	Y	L	R	N	H	T	L	Y
Query Conservation																																									.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.
Template Sequence		R	V	Q	E	Q	R	M	R	E	L	V	R	A	M	G	A	L	E	R	D	L	T	Q	A	V	E	R	P	V	R	D	E	L	G	D	N	R	G	A	F	L	S	E	G	E	N	D	Q	I	V	E	F	T	R	G	G	W	.	.	.	.	.	.	.	.	.	L	Q	R	V	R	W	S	L	S	G	E	T	L	E
Template Known Secondary structure																								T	B	B	S						T	T	S					S					S	G	G	G											.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.													.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure														.	.																			.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																			.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	V	R	T	S	V	D	G	R	K	D	.	.	Q	P	A	Q	A	M	L	E	H	V	E	S	F	L	L	E	S	N	.	.	.	.	.	S	G	E	S	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	L	P	L	S	V	T	L	H	L	Q	T	Q	Q	Y	G	G	L	Q	R	R	F	A	L	P	E
Query Conservation														.	.																			.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																			.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	Y	W	L	V	L	D	R	A	Q	D	S	K	P	R	V	Q	Q	V	L	D	G	V	T	A	L	S	W	R	F	L	D	K	E	H	N	W	Q	G	H	W	P	T	D	E	G	S	E	E	E	R	L	E	S	L	P	L	A	V	E	M	T	L	E	H	R	H	Y	G	K	L	V	R	V	W	R	L	L	D
Template Known Secondary structure									S		G	G	G																						T	T	S				S	S	S	S		S		S											S									T	T	T											S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		177	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	L	K	Q
Template Known Secondary structure		S		B
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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