Job Description P0AFB1 Confidence 99.35% Date Thu Jan 5 11:25:48 GMT 2012 Rank 78 Aligned Residues 214 % Identity 11% Template d2onda1 SCOP info alpha-alpha superhelix TPR-like HAT/Suf repeat Resolution 2.80

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.															.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		R	A	L	A	R	N	D	F	S	Q	A	L	A	I	R	P	D	M	P	E	V	F	N	Y	L	G	I	Y	L	T	Q	A	G	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	Y	E	A	F	D	S	V	L	E	.	L	D	P	T	Y	N	Y	A	H	L	N	R	G	I	A	L	Y	Y
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		T	K	R	V	X	F	A	Y	E	Q	C	L	L	V	L	G	H	H	P	D	I	W	Y	E	A	A	Q	Y	L	E	Q	S	S	K	L	L	A	E	K	G	D	X	N	N	A	K	L	F	S	D	E	A	A	N	I	Y	E	R	A	I	S	T	L	L	K	K	N	X	L	L	Y	F	A	Y	A	D	Y	E	E	S
Template Known Secondary structure																	T	T																						T	S																					T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		G	G	R	D	K	L	A	Q	D	D	L	L	A	F	Y	Q	D	D	P	N	D	P	.	.	F	R	S	L	W	L	Y	L	A	E	Q	K	L	D	E	K	Q	A	K	E	V	L	K	Q	H	F	E	K	S	D	K	E	Q	W	G	W	N	I	V	E	F	Y	L	G	N	I	S	E	Q	T	L	M	E	R	L	K
Query Conservation																								.	.
Alig confidence																								.	.																																														.	.
Template Conservation																																																																							.	.
Template Sequence		R	X	K	Y	E	K	V	H	S	I	Y	N	R	L	L	A	I	E	D	I	D	P	T	L	V	Y	I	Q	Y	X	K	F	A	R	R	A	E	G	I	K	S	G	R	X	I	F	K	K	A	R	E	D	A	R	T	R	H	H	V	Y	V	T	A	A	L	X	E	Y	Y	.	.	C	S	K	D	K	S	V	A	F
Template Known Secondary structure		T	T														T	S	S	S	S		T																													T	S	T	T			T													.	.	T	S
Template Predicted Secondary structure																																																																							.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.			.	.	.	.	.	.	.	.	430
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	T	D	N	T	S	L	A	E	H	L	S	E	T	N	F	Y	L	G	K	Y	Y	L	S	L	G	D	L	D	S	A	T	A	L	F	K	L	A	V	A	N	N	V	H	N	F	V	E	H	R	Y	A	L	L	E	L	S	L	L	G	Q	D	Q	D	D	L	A	E	S	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	F	E	L	G	L	K	K	Y	G	D	I	P	E	Y	V	L	A	Y	I	D	Y	L	S	H	L	N	E	D	N	N	T	R	V	L	F	E	R	V	L	T	S	G	S	L	P	P	E	K	S	G	E	I	W	A	R	F	L	A	F	E	S	N	I	G	D	L	A	S	I	L	K
Template Known Secondary structure												T	T														T	T																S	S	S	S		G	G	G																S
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions