Job Description P0AFB1 Confidence 99.91% Date Thu Jan 5 11:25:48 GMT 2012 Rank 15 Aligned Residues 236 % Identity 13% Template d2h6fa1 SCOP info alpha-alpha superhelix Protein prenylyltransferase Protein prenylyltransferase Resolution 1.50

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		T	L	Q	Q	E	V	I	L	A	R	M	E	Q	I	L	A	S	R	A	L	T	D	D	E	R	A	Q	L	L	Y	E	R	G	V	L	Y	D	S	L	G	L	.	R	A	L	A	R	N	D	F	S	Q	A	L	A	I	R	P	D	M	P	E	V	F	N	Y	L	G	I	Y	L	T	Q	A	G	N	F	D	A	A
Query Conservation																																											.
Alig confidence																		.	.	.	.																						.
Template Conservation																		.	.	.	.
Template Sequence		D	E	R	S	E	R	A	F	K	L	T	R	D	A	I	E	.	.	.	.	L	N	A	A	N	Y	T	V	W	H	F	R	R	V	L	L	K	S	L	Q	K	D	L	H	E	E	M	N	Y	I	T	A	I	I	E	E	Q	P	K	N	Y	Q	V	W	H	H	R	R	V	L	V	E	W	L	R	D	P	S	Q	E
Template Known Secondary structure		T																.	.	.	.			T	T															T	T																		T	T																T			T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.								180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.
Query Sequence		Y	E	A	F	D	S	V	L	E	L	D	P	T	Y	N	Y	A	H	L	N	R	G	I	A	L	Y	Y	G	G	R	D	K	L	A	Q	D	D	L	L	A	F	Y	Q	D	D	P	N	D	P	F	R	S	L	W	L	Y	L	A	E	Q	K	L	D	E	.	.	.	.	.	.	.	K	Q	A	K	E	V	L	K	Q
Query Conservation																																																																		.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	F	I	A	D	I	L	N	Q	D	A	K	N	Y	H	A	W	Q	H	R	Q	W	V	I	Q	E	F	K	L	W	D	N	E	L	Q	Y	V	D	Q	L	L	K	E	D	V	R	N	N	S	V	W	N	Q	R	Y	F	V	I	S	N	T	T	G	Y	N	D	R	A	V	L	E	R	E	V	Q	Y	T	L	E
Template Known Secondary structure													T	T																T			T	T													T	T															T	T		S		S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.										.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.
Query Sequence		H	F	E	K	S	D	K	E	Q	W	G	W	N	I	V	E	F	Y	L	G	N	I	S	E	Q	T	L	M	E	R	L	K	A	D	A	T	D	N	T	S	L	A	E	H	L	S	E	T	N	F	Y	L	G	K	Y	Y	L	S	L	.	.	.	.	.	.	.	.	.	G	D	L	D	S	A	T	A	L	F	K	L
Query Conservation																																																													.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																																							.	.	.	.	.	.	.	.	.
Template Conservation																					.	.
Template Sequence		M	I	K	L	V	P	H	N	E	S	A	W	N	Y	L	K	G	I	L	.	.	Q	D	R	G	L	S	K	Y	P	N	L	L	N	Q	L	L	D	L	Q	P	S	H	S	S	P	Y	L	I	A	F	L	V	D	I	Y	E	D	M	L	E	N	Q	C	D	N	K	E	D	I	L	N	K	A	L	E	L	C	E	I
Template Known Secondary structure						S	T	T													.	.	T	T	T		G	G	G												T	T	T																				T	T		S	S
Template Predicted Secondary structure																					.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	V	A	N	N	V	H	N	F	V	E	H	R	Y	A	L	L	E	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	A	K	E	K	D	T	I	R	K	E	Y	W	R	Y	I	G	R	S	L
Template Known Secondary structure					T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions