Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFB1
Confidence99.95%DateThu Jan 5 11:25:48 GMT 2012
Rank2Aligned Residues251
% Identity19%Templated1w3ba_
SCOP infoalpha-alpha superhelix TPR-like Tetratricopeptide repeat (TPR)
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  VLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ
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Template Sequence  ELAHREYQAGDFEAAERHCMQLWR. . . . QEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKE
Template Known Secondary structure  TT
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TT
TT

TT
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   16...20.........30......... 40.........50.........60.........70.........80.........90.
 
   109110.........120.........130.........140.........150.........160.........170. ........180.......
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Query Sequence  AGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLY. LAEQKLDEKQAKEVLK
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Template Sequence  RGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYL
Template Known Secondary structure  T

TT
S
SS
TT
TTTS
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   188.190.........200........
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Query Sequence  QHFEKSDKEQWGWNIVEFYLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVV
Template Known Secondary structure 
TT
TTT

TT
TTT
TT
TT
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   209210....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NISEQT
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Template Conservation                  
                                 
                             
Template Sequence  HGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQG
Template Known Secondary structure  TT
T
SS
S

TT
TTT
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   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
   215....220.........230.........240.........250.........260.........270.........280.......
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Query Sequence  LMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDD
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Template Sequence  NIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF. . . . ADAYSNMGNTLKEMQD
Template Known Secondary structure 
TTS
TT
TTT

TT
TT
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   332.......340.........350.........360.........370.........380.... .....390.........400
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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