Job Description P0AFB1 Confidence 99.47% Date Thu Jan 5 11:25:48 GMT 2012 Rank 64 Aligned Residues 180 % Identity 17% Template c3qdnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin protein; PDBTitle: putative thioredoxin protein from salmonella typhimurium Resolution 2.09 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	I	L	A	S	R	A	L	T	D	D	E	R	A	Q	L	L	Y	E	R	G	V	L	Y	D	S	L	G	L	R	A	L	A	R	N	D	F	S	Q	A	L	A	I	R	P	D	M	P	E	V	F	N	Y	L	G	I	Y	L	T	Q	A	G	N	F	D	A	A	Y	E	A	F	D	S	V	L	E	L	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	I	R	A	L	L	D	K	V	L	P	R	E	E	E	L	K	A	Q	Q	A	X	Q	L	X	Q	E	G	N	Y	I	D	A	L	P	L	L	K	D	A	W	Q	L	S	S	Q	N	S	E	I	G	L	L	L	A	E	A	Q	I	A	L	N	R	S	E	E	A	E	A	V	L	K	T	I	P	L	Q	D	Q
Template Known Secondary structure										T	T	S																	T	T																T	T	S															T	T										T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	N	Y	A	H	L	N	R	G	I	A	L	Y	Y	G	G	R	D	K	L	A	Q	D	D	L	L	A	F	Y	Q	D	D	P	N	D	P	F	R	S	L	W	L	Y	L	A	E	Q	K	L	D	E	K	Q	A	K	E	V	L	K	Q	H	F	E	K	S	D	K	E	Q	W	G	W	N	I	V	E	F	Y	L
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	T	R	Y	Q	G	L	V	A	Q	I	E	L	L	K	Q	A	A	D	T	P	E	I	Q	Q	L	Q	Q	Q	V	A	D	N	P	Q	D	A	A	L	A	T	Q	L	A	L	Q	L	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																			T														S		T	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		G	N	I	S	E	Q	T	L	M	E	R	L	K	A	D	A	T	D	N	T	S	L	A	E	H	.	.	L	S	E	T	N	F	Y	L	G	K	Y	Y	L	S	L	G	D	L	D	S	A	T	A	L	F	K	L	A	V	A	N
Query Conservation																											.	.
Alig confidence		.	.	.	.	.																					.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	V	G	R	N	E	E	A	L	E	L	L	F	S	H	L	R	K	D	L	T	A	A	E	G	Q	T	R	K	T	F	Q	E	I	L	A	A	L	G	T	G	D	A	L	A	S	K	Y	R	R	Q	L	Y	A
Template Known Secondary structure		.	.	.	.	.	T	T														T	T		T	T	T	T	T	T															T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions