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Job Description | P0AFB1 | Confidence | 24.20% | Date | Thu Jan 5 11:25:48 GMT 2012 |
Rank | 135 | Aligned Residues | 101 |
% Identity | 12% | Template | c3mkqB_ |
PDB info |
PDB header:transport protein | Chain: B: PDB Molecule:coatomer subunit alpha; |
PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat
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Resolution | 2.50 Å |
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71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
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Query Sequence |   |
L | Y | D | S | L | G | L | R | A | L | A | R | N | D | F | S | Q | A | L | A | I | R | P | D | M | P | E | V | F | N | Y | L | G | I | Y | L | T | Q | A | G | N | F | D | A | A | Y | E | A | F | D | S | V | L | E | L | D | P | T | Y | N | Y | A | H | L | N | R | G | I | A | L | Y | Y | G | G | R | D | K | L | A | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | A | L | E | Y | G | N | L | D | A | A | L | D | E | A | K | K | L | . |
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N | D | S | I | T | W | E | R | L | I | Q | E | A | L | A | Q | G | N | A | S | L | A | E | M | I | Y | Q | T | Q | H | S | F | D | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
655 | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | |
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. | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . |
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151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
D | D | L | L | A | F | Y | Q | D | D | P | N | D | P | F | R | S | L | W | L | Y | L | A | E | Q | K | L | D | E | K | Q | A | K | E | V | L | K | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | M | Q | N | I | A | Q | T | R | E | . |
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D | F | G | S | M | L | L | N | T | F | Y | N | N | S | T | K | E | R | S | S | I | F | A | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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722 | . | . | . | . | . | . | . | 730 | . | |
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. | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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